RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 IGKV6D-21A0A0A0MT36 114 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 OR52Z1P0C646 297 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 TXKP42681 527 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 KRT76Q01546 638 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 DNM1Q05193 864 aaKnown RBP14.23□□□□□ -0.13
SF3B3-206ENST00000565990 LRCH2Q5VUJ6 765 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 ABHD15Q6UXT9 468 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 LINC00301Q8NCQ3 95 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 ARRDC4Q8NCT1 418 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 OR6J1Q8NGC5 347 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 AFG1LQ8WV93 481 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 LENG1Q96BZ8 264 aaPredicted RBP14.23□□□□□ -0.13
SF3B3-206ENST00000565990 TSEN34Q9BSV6 310 aaKnown RBP14.23□□□□□ -0.13
SF3B3-206ENST00000565990 GZF1Q9H116 711 aaPredicted RBP14.23□□□□□ -0.13
SF3B3-206ENST00000565990 TTC12Q9H892 705 aaPredicted RBP14.23□□□□□ -0.13
SF3B3-206ENST00000565990 LMBRD1Q9NUN5 540 aa14.23□□□□□ -0.13
SF3B3-206ENST00000565990 KPNA6O60684 536 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 GAS7O60861 476 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 YEATS4O95619 227 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 PGK1P00558 417 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
SF3B3-206ENST00000565990 CPT1AP50416 773 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.132e-6■■□□□ 14.4
SF3B3-206ENST00000565990 ACTR2P61160 394 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 IRX5P78411 483 aaPredicted RBP14.22□□□□□ -0.13
SF3B3-206ENST00000565990 LRRC41Q15345 812 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 FSCN1Q16658 493 aaKnown RBP14.22□□□□□ -0.13
SF3B3-206ENST00000565990 SMAP1Q8IYB5 467 aaPredicted RBP14.22□□□□□ -0.13
SF3B3-206ENST00000565990 RDM1Q8NG50 284 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 U2AF1L4Q8WU68 220 aaKnown RBP14.22□□□□□ -0.13
SF3B3-206ENST00000565990 SPATA33Q96N06 139 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 UIMC1Q96RL1 719 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 TEKT3Q9BXF9 490 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
SF3B3-206ENST00000565990 SPC25Q9HBM1 224 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 PKD2L1Q9P0L9 805 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 PCDHA10Q9Y5I2 948 aa14.22□□□□□ -0.13
SF3B3-206ENST00000565990 MYADML2A6NDP7 307 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 EML1O00423 815 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 MARCH6O60337 910 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 PPP6R2O75170 966 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 MYCP01106 439 aaPredicted RBP14.21□□□□□ -0.13
SF3B3-206ENST00000565990 MMP3P08254 477 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 SFNP31947 248 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 TECP42680 631 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 DGKDQ16760 1214 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 GNASQ5JWF2 1037 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 DTHD1Q6ZMT9 781 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 RNF180Q86T96 592 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 IGSF22Q8N9C0 903 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 SYAP1Q96A49 352 aaPredicted RBP14.21□□□□□ -0.13
SF3B3-206ENST00000565990 FERMT2Q96AC1 680 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.13
SF3B3-206ENST00000565990 TMEM106CQ9BVX2 250 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 UNC45AQ9H3U1 944 aa14.21□□□□□ -0.13
SF3B3-206ENST00000565990 SRPRBQ9Y5M8 271 aaKnown RBP14.21□□□□□ -0.13
SF3B3-206ENST00000565990 ELP1O95163 1332 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 BRCA2P51587 3418 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 LGR5O75473 907 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 TFRCP02786 760 aaKnown RBP14.2□□□□□ -0.14
SF3B3-206ENST00000565990 C6orf222P0C671 652 aaPredicted RBP14.2□□□□□ -0.14
SF3B3-206ENST00000565990 EPHA7Q15375 998 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 KCNA10Q16322 511 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 BRDTQ58F21 947 aaPredicted RBP14.2□□□□□ -0.14
SF3B3-206ENST00000565990 PLPPR4Q7Z2D5 763 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 ANKLE1Q8NAG6 615 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 PCSK9Q8NBP7 692 aaKnown RBP14.2□□□□□ -0.14
SF3B3-206ENST00000565990 AFAP1L1Q8TED9 768 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 ABHD8Q96I13 439 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 HSD17B14Q9BPX1 270 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 C16orf70Q9BSU1 422 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
SF3B3-206ENST00000565990 DISC1Q9NRI5 854 aa14.2□□□□□ -0.14
SF3B3-206ENST00000565990 FBXO2Q9UK22 296 aaPredicted RBP14.2□□□□□ -0.14
SF3B3-206ENST00000565990 KIAA0100Q14667 2235 aaKnown RBP14.2□□□□□ -0.14
SF3B3-206ENST00000565990 MOXD2PA6NHM9 499 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 WDR64B1ANS9 1081 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 DNM1LO00429 736 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
SF3B3-206ENST00000565990 SPTLC2O15270 562 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 ZEB2O60315 1214 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 SORBS3O60504 671 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 ASGR1P07306 291 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 SUPT20HL2P0C7V6 817 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 TCF7P36402 384 aaPredicted RBP14.19□□□□□ -0.14
SF3B3-206ENST00000565990 JAK3P52333 1124 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 KRT85P78386 507 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 PURAQ00577 322 aaKnown RBP14.19□□□□□ -0.14
SF3B3-206ENST00000565990 BEX3Q00994 111 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 CEBPZQ03701 1054 aaKnown RBP14.19□□□□□ -0.14
SF3B3-206ENST00000565990 KAT2BQ92831 832 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 CHAMP1Q96JM3 812 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 PCYT2Q99447 389 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 SCAND2PQ9GZW5 306 aaPredicted RBP14.19□□□□□ -0.14
SF3B3-206ENST00000565990 PHF24Q9UPV7 400 aa14.19□□□□□ -0.14
SF3B3-206ENST00000565990 MAFBQ9Y5Q3 323 aaPredicted RBP14.19□□□□□ -0.14
SF3B3-206ENST00000565990 SCN10AQ9Y5Y9 1956 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 ESPNB1AK53 854 aa14.18□□□□□ -0.14
SF3B3-206ENST00000565990 DDX39AO00148 427 aaKnown RBP14.18□□□□□ -0.14
SF3B3-206ENST00000565990 HAS3O00219 553 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms