RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 FOXD4Q12950 439 aaPredicted RBP14.71□□□□□ -0.06
CX3CL1-204ENST00000565912 CCDC197Q8NCU1 140 aa14.71□□□□□ -0.06
CX3CL1-204ENST00000565912 TPX2Q9ULW0 747 aaKnown RBP14.71□□□□□ -0.06
CX3CL1-204ENST00000565912 ERVK-7P63135 1459 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 PPP1R12AO14974 1030 aaPredicted RBP14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 ELF1P32519 619 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 SOX5P35711 763 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 PROSER3Q2NL68 480 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 ANKRD20A4Q4UJ75 823 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 ANKRD20A8PQ5CZ79 823 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 ANKRD20A2Q5SQ80 823 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 ANKRD20A1Q5TYW2 823 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 RASIP1Q5U651 963 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 CDC23Q9UJX2 597 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 WDR64B1ANS9 1081 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 EVI5O60447 810 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 FTCDO95954 541 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 MT-ND3P03897 115 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 FKBP3Q00688 224 aaKnown RBP14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 FAM182BQ5T319 152 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 USP17L2Q6R6M4 530 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 MAP4K1Q92918 833 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 PPP1R13BQ96KQ4 1090 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 TBK1Q9UHD2 729 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 LRRD1A4D1F6 860 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 MARK3P27448 753 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 CDC25AP30304 524 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 UBE2SQ16763 222 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 ZNF658Q5TYW1 1059 aaPredicted RBP14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 FAM81BQ96LP2 452 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 CARMIL3Q8ND23 1372 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 PSAPP07602 524 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 CXCR5P32302 372 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 GCKP35557 465 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 CCT5P48643 541 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 KCNQ4P56696 695 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 CHAMP1Q96JM3 812 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 SLC8A2Q9UPR5 921 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 JRKLQ9Y4A0 524 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 PGRMC1O00264 195 aaKnown RBP14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 KRT33BQ14525 404 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 DSTYKQ6XUX3 929 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 GPT2Q8TD30 523 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 KRT82Q9NSB4 513 aa14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 TRPC5Q9UL62 973 aaPredicted RBP14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 ABT1Q9ULW3 272 aaKnown RBP14.7□□□□□ -0.06
CX3CL1-204ENST00000565912 SPATA31E1Q6ZUB1 1445 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 IL6STP40189 918 aaPredicted RBP14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 KPNA2P52292 529 aaKnown RBP14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 PDXDC2PQ6P474 469 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 LCORLQ8N3X6 602 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 DYNLL2Q96FJ2 89 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 ANTXR1Q9H6X2 564 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 EMILIN3Q9NT22 766 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 MYOM2P54296 1465 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 ARHGEF37A1IGU5 675 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 BBOX1O75936 387 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 MOCS3O95396 460 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 SLC8A1P32418 973 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 GCNAQ96QF7 691 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 ZNF18P17022 549 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 SLCO1A2P46721 670 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 C2orf54Q08AI8 447 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 GOLGA8IPA6NC78 632 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 GOLGA8JA6NMD2 632 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 APOEP02649 317 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 CYP21A2P08686 494 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 USP17L8P0C7I0 530 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 IFT88Q13099 833 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 ARMCX2Q7L311 632 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 RPF1Q9H9Y2 349 aaKnown RBP14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 RGS12O14924 1447 aa14.69□□□□□ -0.06
CX3CL1-204ENST00000565912 PMLP29590 882 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 MXI1P50539 228 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 SNAP25P60880 206 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 NLRP4Q96MN2 994 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 PARVGQ9HBI0 331 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 ATP10DQ9P241 1426 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 EIF2AK2P19525 551 aaKnown RBP14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 SNCBQ16143 134 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 PPP1R2P3Q6NXS1 205 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 SUCLA2Q9P2R7 463 aaPredicted RBP14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 NRBP1Q9UHY1 535 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 HOXA13P31271 388 aaPredicted RBP14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 NR5A1Q13285 461 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 TMC4Q7Z404 712 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 DEPDC1BQ8WUY9 529 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 ADD2P35612 726 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 DPCR1Q3MIW9 517 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 ZNF589Q86UQ0 364 aaPredicted RBP14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 CCDC138Q96M89 665 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 FAM49AQ9H0Q0 323 aaPredicted RBP14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 DHX36Q9H2U1 1008 aaKnown RBP14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 SLITRK6Q9H5Y7 841 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 GPR108Q9NPR9 543 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 INPP5FQ9Y2H2 1132 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 PLA2G4BP0C869 781 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 CDO1Q16878 200 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms