RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PTPRUQ92729 1446 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 BCL9LQ86UU0 1499 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 NWD2Q9ULI1 1742 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 NKRFO15226 690 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC00561-201ENST00000565815 RAB11FIP3O75154 756 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 CPP00450 1065 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 DNM2P50570 870 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 RNF187Q5TA31 235 aaPredicted RBP5.63□□□□□ -1.51
LINC00561-201ENST00000565815 RNF111Q6ZNA4 994 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 SLCO6A1Q86UG4 719 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 ZC3H7AQ8IWR0 971 aaKnown RBP5.63□□□□□ -1.51
LINC00561-201ENST00000565815 RAVER1Q8IY67 606 aaKnown RBP5.63□□□□□ -1.51
LINC00561-201ENST00000565815 COG1Q8WTW3 980 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 PUS7Q96PZ0 661 aaKnown RBP5.63□□□□□ -1.51
LINC00561-201ENST00000565815 MRPL4Q9BYD3 311 aaKnown RBP5.63□□□□□ -1.51
LINC00561-201ENST00000565815 PLAAQ9Y263 795 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 SLIT2O94813 1529 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 ADGRB2O60241 1585 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 MYO5BQ9ULV0 1848 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 LTFP02788 710 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 FUCA1P04066 466 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 SOD2P04179 222 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 CKMP06732 381 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 RTP1P59025 263 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 FNDC3BQ53EP0 1204 aaKnown RBP5.63□□□□□ -1.51
LINC00561-201ENST00000565815 FYB2Q5VWT5 728 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 CEP68Q76N32 757 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 TMPRSS7Q7RTY8 843 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 DCAF4Q8WV16 495 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 SYT3Q9BQG1 590 aa5.63□□□□□ -1.51
LINC00561-201ENST00000565815 COBLO75128 1261 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 RNASE1P07998 156 aaKnown RBP5.62□□□□□ -1.51
LINC00561-201ENST00000565815 HSF5Q4G112 596 aaPredicted RBP5.62□□□□□ -1.51
LINC00561-201ENST00000565815 CPZQ66K79 652 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 KRT27Q7Z3Y8 459 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 DTX1Q86Y01 620 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 PRPF38AQ8NAV1 312 aaKnown RBP5.62□□□□□ -1.51
LINC00561-201ENST00000565815 VTA1Q9NP79 307 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 SAMD15Q9P1V8 674 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 RNF112Q9ULX5 631 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 RPGRIP1LQ68CZ1 1315 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 ANKRD50Q9ULJ7 1429 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 KIF1AQ12756 1690 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 hCG_2014768A0A024R1R8 64 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 M0R2C6 588 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 VIL1P09327 827 aaKnown RBP5.62□□□□□ -1.51
LINC00561-201ENST00000565815 NOP2P46087 812 aaKnown RBP5.62□□□□□ -1.51
LINC00561-201ENST00000565815 DDX42Q86XP3 938 aaKnown RBP eCLIP5.62□□□□□ -1.51
LINC00561-201ENST00000565815 TP53INP2Q8IXH6 220 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 CMIPQ8IY22 773 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 TRIM8Q9BZR9 551 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 KCNK12Q9HB15 430 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 GPR27Q9NS67 375 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 MBNL3Q9NUK0 354 aaKnown RBP5.62□□□□□ -1.51
LINC00561-201ENST00000565815 VAV3Q9UKW4 847 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 NEXMIFQ5QGS0 1516 aa5.62□□□□□ -1.51
LINC00561-201ENST00000565815 CCDC66A2RUB6 948 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 ARVCFO00192 962 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 TRAF5O00463 557 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 KCNQ2O43526 872 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 ADAM23O75077 832 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 NTRK1P04629 796 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 PDE6AP16499 860 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 KRT15P19012 456 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 GRK2P25098 689 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 GRK3P35626 688 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 MVKQ03426 396 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 PLCL1Q15111 1095 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 CPSF6Q16630 551 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 ZCCHC8Q6NZY4 707 aaKnown RBP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 AFAP1L2Q8N4X5 818 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 CCDC8Q9H0W5 538 aaPredicted RBP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 CLDND1Q9NY35 253 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 KLHL42Q9P2K6 505 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 SNX11Q9Y5W9 270 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 CDC42BPGQ6DT37 1551 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 PRKCAP17252 672 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 NBPF8Q3BBV2 869 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 ACBD5Q5T8D3 534 aaPredicted RBP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 ANGEL2Q5VTE6 544 aaKnown RBP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 MAMDC2Q7Z304 686 aaPredicted RBP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 OSTM1Q86WC4 334 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 MAGEB10Q96LZ2 347 aaPredicted RBP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 CD244Q9BZW8 370 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 CRTAC1Q9NQ79 661 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 CCDC144AA2RUR9 1427 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 RRBP1Q9P2E9 1410 aaKnown RBP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 ROCK1Q13464 1354 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 WTIPA6NIX2 430 aaPredicted RBP5.61□□□□□ -1.51
LINC00561-201ENST00000565815 C22orf46C9J442 243 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 NEMP1O14524 444 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 KATNA1O75449 491 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 KRT37O76014 449 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 IGFALSP35858 605 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 JAM2P57087 298 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 SEC23AQ15436 765 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 CFAP100Q494V2 611 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 PLEKHO2Q8TD55 490 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 ATP8A1Q9Y2Q0 1164 aa5.61□□□□□ -1.51
LINC00561-201ENST00000565815 NALCNQ8IZF0 1738 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms