RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 SERINC5Q86VE9 423 aa13.09□□□□□ -0.31
CAPN3-215ENST00000565559 KCNG4Q8TDN1 519 aa13.09□□□□□ -0.31
CAPN3-215ENST00000565559 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
CAPN3-215ENST00000565559 STRBPQ96SI9 672 aaKnown RBP13.09□□□□□ -0.31
CAPN3-215ENST00000565559 BCL11AQ9H165 835 aa13.09□□□□□ -0.31
CAPN3-215ENST00000565559 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
CAPN3-215ENST00000565559 MFSD1Q9H3U5 465 aa13.09□□□□□ -0.31
CAPN3-215ENST00000565559 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
CAPN3-215ENST00000565559 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
CAPN3-215ENST00000565559 LCTP09848 1927 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 FSD2A1L4K1 749 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 HAS3O00219 553 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 ZNF286BP0CG31 522 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 TFAP4Q01664 338 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 NAALADL2Q58DX5 795 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 RBM23Q86U06 439 aaKnown RBP13.08□□□□□ -0.32
CAPN3-215ENST00000565559 P2RX5Q93086 422 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 ZBTB40Q9NUA8 1239 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 MTMR7Q9Y216 660 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.32
CAPN3-215ENST00000565559 ZNF292O60281 2723 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 C17orf102A2RUQ5 167 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 CHGBP05060 677 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 APPP05067 770 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 LINC00271P0C7V0 271 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 SRGAP2BP0DMP2 458 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 LAMC2Q13753 1193 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 SYDE2Q5VT97 1194 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 ADGRD2Q7Z7M1 963 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 SPNS2Q8IVW8 549 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 KREMEN2Q8NCW0 462 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 PPTC7Q8NI37 304 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 DCAF4Q8WV16 495 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 ATP6V0A1Q93050 837 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-215ENST00000565559 HAUS7Q99871 368 aa13.07□□□□□ -0.32
CAPN3-215ENST00000565559 EP300Q09472 2414 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-215ENST00000565559 ACACBO00763 2458 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 CTSHP09668 335 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 ATP5JP18859 108 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 GNAT2P19087 354 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 CAMK1Q14012 370 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 PROX2Q3B8N5 592 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 ADGRD1Q6QNK2 874 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 KIAA2013Q8IYS2 634 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 SUSD6Q92537 303 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 KIF1BPQ96EK5 621 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 NEK1Q96PY6 1258 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 SEMA4AQ9H3S1 761 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 TLE6Q9H808 572 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 SORCS3Q9UPU3 1222 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 NR2E1Q9Y466 385 aa13.06□□□□□ -0.32
CAPN3-215ENST00000565559 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 RBAK-RBAKDNI3L0D1 243 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 GLP2RO95838 553 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 SLC16A2P36021 539 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 CLCN5P51795 746 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 STXBP2Q15833 593 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 SMYD5Q6GMV2 418 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 HINFPQ9BQA5 517 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 PCDHGC5Q9Y5F6 944 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 MRVI1Q9Y6F6 885 aa13.05□□□□□ -0.32
CAPN3-215ENST00000565559 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 PPFIA4O75335 1185 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 LMNAP02545 664 aaKnown RBP13.04□□□□□ -0.32
CAPN3-215ENST00000565559 ITGB1P05556 798 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 BTNL9Q6UXG8 535 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 SPPL3Q8TCT6 385 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 MICAL1Q8TDZ2 1067 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
CAPN3-215ENST00000565559 POF1BQ8WVV4 589 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 CDCA3Q99618 268 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-215ENST00000565559 RC3H2Q9HBD1 1191 aaKnown RBP13.04□□□□□ -0.32
CAPN3-215ENST00000565559 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
CAPN3-215ENST00000565559 VPS13AQ96RL7 3174 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 CHD8Q9HCK8 2581 aa13.04□□□□□ -0.32
CAPN3-215ENST00000565559 WDR87Q6ZQQ6 2873 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 SP100P23497 879 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-215ENST00000565559 DNAJB1P25685 340 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 HIC1Q14526 733 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 RASGRP2Q7LDG7 609 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 KLHL23Q8NBE8 558 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 RGS22Q8NE09 1264 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-215ENST00000565559 WDR19Q8NEZ3 1342 aa13.03□□□□□ -0.32
CAPN3-215ENST00000565559 ATG2AQ2TAZ0 1938 aa13.02□□□□□ -0.32
CAPN3-215ENST00000565559 BRD1O95696 1058 aa13.02□□□□□ -0.33
CAPN3-215ENST00000565559 GNAT1P11488 350 aa13.02□□□□□ -0.33
CAPN3-215ENST00000565559 ANGPT1Q15389 498 aa13.02□□□□□ -0.33
CAPN3-215ENST00000565559 ST3GAL2Q16842 350 aa13.02□□□□□ -0.33
CAPN3-215ENST00000565559 CMTR2Q8IYT2 770 aaKnown RBP13.02□□□□□ -0.33
CAPN3-215ENST00000565559 ZNF689Q96CS4 500 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms