RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 NID2Q14112 1375 aa22.75■■□□□ 1.23
CLN6-206ENST00000565471 GSTTP1A0A1W2PQM5 241 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 TLL1O43897 1013 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 CPA1P15085 419 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 METAP2P50579 478 aaKnown RBP eCLIP22.74■■□□□ 1.23
CLN6-206ENST00000565471 DEFB103AP81534 67 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 TAP1Q03518 808 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 AP3B2Q13367 1082 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 Q6ZUG5 572 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 LMBR1Q8WVP7 490 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 MXRA8Q9BRK3 442 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 ANO3Q9BYT9 981 aa22.74■■□□□ 1.23
CLN6-206ENST00000565471 SMCO2A6NFE2 343 aa22.73■■□□□ 1.23
CLN6-206ENST00000565471 APOBRQ0VD83 1088 aa22.73■■□□□ 1.23
CLN6-206ENST00000565471 PLEKHG4Q58EX7 1191 aa22.73■■□□□ 1.23
CLN6-206ENST00000565471 BRF1Q92994 677 aa22.73■■□□□ 1.23
CLN6-206ENST00000565471 AGXT2Q9BYV1 514 aa22.73■■□□□ 1.23
CLN6-206ENST00000565471 KCNH7Q9NS40 1196 aa22.73■■□□□ 1.23
CLN6-206ENST00000565471 ERAP1Q9NZ08 941 aa22.73■■□□□ 1.23
CLN6-206ENST00000565471 NAP1L2Q9ULW6 460 aaPredicted RBP22.73■■□□□ 1.23
CLN6-206ENST00000565471 EPB41L2O43491 1005 aaKnown RBP22.72■■□□□ 1.23
CLN6-206ENST00000565471 ARHGEF15O94989 841 aa22.72■■□□□ 1.23
CLN6-206ENST00000565471 GJB5O95377 273 aa22.72■■□□□ 1.23
CLN6-206ENST00000565471 POU3F3P20264 500 aaPredicted RBP22.72■■□□□ 1.23
CLN6-206ENST00000565471 ADD1P35611 737 aaKnown RBP22.72■■□□□ 1.23
CLN6-206ENST00000565471 CLK2P49760 499 aaKnown RBP22.72■■□□□ 1.23
CLN6-206ENST00000565471 ARHGAP4P98171 946 aa22.72■■□□□ 1.23
CLN6-206ENST00000565471 MKRN4PQ13434 485 aaPredicted RBP22.72■■□□□ 1.23
CLN6-206ENST00000565471 PFKFB3Q16875 520 aaPredicted RBP22.72■■□□□ 1.23
CLN6-206ENST00000565471 DBF4BQ8NFT6 615 aa22.72■■□□□ 1.23
CLN6-206ENST00000565471 PPM1EQ8WY54 764 aa22.72■■□□□ 1.23
CLN6-206ENST00000565471 ZBED2Q9BTP6 218 aa22.72■■□□□ 1.23
CLN6-206ENST00000565471 SMARCAD1Q9H4L7 1026 aa22.72■■□□□ 1.23
CLN6-206ENST00000565471 JPH1Q9HDC5 661 aaPredicted RBP22.72■■□□□ 1.23
CLN6-206ENST00000565471 PKD2L1Q9P0L9 805 aa22.72■■□□□ 1.23
CLN6-206ENST00000565471 CHD7Q9P2D1 2997 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 RPS6KB1P23443 525 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 PSMA5P28066 241 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 SREBF1P36956 1147 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 CEP55Q53EZ4 464 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 TAF2Q6P1X5 1199 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 RPAINQ86UA6 219 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 PGBD1Q96JS3 809 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 SLC9A2Q9UBY0 812 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 PRUNE2Q8WUY3 3088 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 NFASCO94856 1347 aa22.71■■□□□ 1.23
CLN6-206ENST00000565471 KAT6AQ92794 2004 aa22.7■■□□□ 1.23
CLN6-206ENST00000565471 CUL9Q8IWT3 2517 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 ESYT2A0FGR8 921 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 SCG2P13521 617 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 PPFIA1Q13136 1202 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 FAM26DQ5JW98 314 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 TMCO2Q7Z6W1 182 aaPredicted RBP22.7■■□□□ 1.22
CLN6-206ENST00000565471 CYP2W1Q8TAV3 490 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 SYMPKQ92797 1274 aaKnown RBP22.7■■□□□ 1.22
CLN6-206ENST00000565471 GLG1Q92896 1179 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 RAD9AQ99638 391 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 MICAL3Q7RTP6 2002 aa22.7■■□□□ 1.22
CLN6-206ENST00000565471 CTSHP09668 335 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 CCDC85BQ15834 202 aaPredicted RBP22.69■■□□□ 1.22
CLN6-206ENST00000565471 TJAP1Q5JTD0 557 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 NIPA1Q7RTP0 329 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 CCDC12Q8WUD4 166 aaPredicted RBP22.69■■□□□ 1.22
CLN6-206ENST00000565471 ATXN2LQ8WWM7 1075 aaKnown RBP22.69■■□□□ 1.22
CLN6-206ENST00000565471 ARNTL2Q8WYA1 636 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 SEPT8Q92599 483 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 SDF4Q9BRK5 362 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 CERS4Q9HA82 394 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 PRDM6Q9NQX0 595 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 TMEM260Q9NX78 707 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 THEGQ9P2T0 379 aa22.69■■□□□ 1.22
CLN6-206ENST00000565471 LCHNA4D1U4 455 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 MBLAC1A4D2B0 266 aaPredicted RBP22.68■■□□□ 1.22
CLN6-206ENST00000565471 EPOPA6NHQ4 379 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 RFXAPO00287 272 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 MEIS1O00470 390 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 PRPF3O43395 683 aaKnown RBP22.68■■□□□ 1.22
CLN6-206ENST00000565471 GTPBP6O43824 516 aaPredicted RBP22.68■■□□□ 1.22
CLN6-206ENST00000565471 AMHP03971 560 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 ARP10275 920 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 EVCP57679 992 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 GRIK4Q16099 956 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 MCTP2Q6DN12 878 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.68■■□□□ 1.221e-6■■■■■ 32.3
CLN6-206ENST00000565471 ZMYND12Q9H0C1 365 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 AGO4Q9HCK5 861 aaKnown RBP22.68■■□□□ 1.22
CLN6-206ENST00000565471 MTCH2Q9Y6C9 303 aa22.68■■□□□ 1.22
CLN6-206ENST00000565471 MARK3P27448 753 aa22.67■■□□□ 1.22
CLN6-206ENST00000565471 PKN1Q16512 942 aa22.67■■□□□ 1.22
CLN6-206ENST00000565471 CRYGNQ8WXF5 182 aa22.67■■□□□ 1.22
CLN6-206ENST00000565471 APBB2Q92870 758 aa22.67■■□□□ 1.22
CLN6-206ENST00000565471 PCYT2Q99447 389 aa22.67■■□□□ 1.22
CLN6-206ENST00000565471 AZI2Q9H6S1 392 aa22.67■■□□□ 1.22
CLN6-206ENST00000565471 C6orf50Q9HD87 102 aa22.67■■□□□ 1.22
CLN6-206ENST00000565471 TUBE1Q9UJT0 475 aa22.67■■□□□ 1.22
CLN6-206ENST00000565471 RPLP2P05387 115 aaKnown RBP22.66■■□□□ 1.22
CLN6-206ENST00000565471 NEFLP07196 543 aa22.66■■□□□ 1.22
CLN6-206ENST00000565471 ACTR2P61160 394 aa22.66■■□□□ 1.22
CLN6-206ENST00000565471 ITGB3BPQ13352 177 aaPredicted RBP22.66■■□□□ 1.22
CLN6-206ENST00000565471 RUFY4Q6ZNE9 571 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms