RNA–Protein interactions for RNA: ENST00000565457.5

CNEP1R1-205, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5

Gene CNEP1R1, Length 1,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-205ENST00000565457 GDF6Q6KF10 455 aaPredicted RBP11.77□□□□□ -0.53
CNEP1R1-205ENST00000565457 C7orf31Q8N865 590 aa11.77□□□□□ -0.53
CNEP1R1-205ENST00000565457 GJA10Q969M2 543 aa11.77□□□□□ -0.53
CNEP1R1-205ENST00000565457 LENG9Q96B70 501 aa11.77□□□□□ -0.53
CNEP1R1-205ENST00000565457 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
CNEP1R1-205ENST00000565457 CTAGE1Q96RT6 745 aa11.77□□□□□ -0.53
CNEP1R1-205ENST00000565457 H3BRB1 525 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 CCNE2O96020 404 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 TIMP1P01033 207 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 XBP1P17861 261 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 GALNT17Q6IS24 598 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 NIPA1Q7RTP0 329 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 SDF4Q9BRK5 362 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 ZNF577Q9BSK1 485 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 NOC4LQ9BVI4 516 aaKnown RBP11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 HIPK3Q9H422 1215 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 TUT1Q9H6E5 874 aaKnown RBP11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 SLC9A2Q9UBY0 812 aa11.76□□□□□ -0.53
CNEP1R1-205ENST00000565457 IPO5O00410 1097 aaKnown RBP11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 DHX15O43143 795 aaKnown RBP11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 MARK3P27448 753 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 CIITAP33076 1130 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 CCL23P55773 120 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 ACTR2P61160 394 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 NONOQ15233 471 aaKnown RBP eCLIP11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 PTGISQ16647 500 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 KRT40Q6A162 431 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 PIK3AP1Q6ZUJ8 805 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 FAM177A1Q8N128 213 aaPredicted RBP11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 SEPT1Q8WYJ6 367 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 TMX3Q96JJ7 454 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 KATNAL1Q9BW62 490 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 SEZ6LQ9BYH1 1024 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 RNPEPQ9H4A4 650 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 GTF2IRD1Q9UHL9 959 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 NFASCO94856 1347 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 LTBP2Q14767 1821 aa11.75□□□□□ -0.53
CNEP1R1-205ENST00000565457 CCDC194A0A1B0GVG4 234 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 BTBD18B2RXH4 712 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 MSH4O15457 936 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 SMIM10L2AP0DMW4 78 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 SMIM10L2BP0DMW5 78 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 CSF2RAP15509 400 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 BMP8BP34820 402 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 USP11P51784 963 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 LETM2Q2VYF4 491 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 KRT25Q7Z3Z0 450 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 PCYT2Q99447 389 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 WNT8AQ9H1J5 351 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 MMP1P03956 469 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 SUPT20HL2P0C7V6 817 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 KRT2P35908 639 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 SETQ01105 290 aaPredicted RBP11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 FPGSQ05932 587 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 PTPN11Q06124 597 aaPredicted RBP11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 TRIM29Q14134 588 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 MFSD5Q6N075 450 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 SESTD1Q86VW0 696 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 DHX38Q92620 1227 aaKnown RBP11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 GLG1Q92896 1179 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 TNFRSF25Q93038 417 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 WNT8BQ93098 351 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 SCLYQ96I15 445 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 SETD4Q9NVD3 440 aa11.74□□□□□ -0.53
CNEP1R1-205ENST00000565457 SLC37A4O43826 429 aa11.73□□□□□ -0.53
CNEP1R1-205ENST00000565457 ACRP10323 421 aa11.73□□□□□ -0.53
CNEP1R1-205ENST00000565457 SHHQ15465 462 aa11.73□□□□□ -0.53
CNEP1R1-205ENST00000565457 C16orf59Q7L2K0 433 aa11.73□□□□□ -0.53
CNEP1R1-205ENST00000565457 ZBTB10Q96DT7 871 aa11.73□□□□□ -0.53
CNEP1R1-205ENST00000565457 C8orf76Q96K31 380 aa11.73□□□□□ -0.53
CNEP1R1-205ENST00000565457 ZNF215Q9UL58 517 aaPredicted RBP11.73□□□□□ -0.53
CNEP1R1-205ENST00000565457 CYP3A7-CYP3A51PA0A087WV96 503 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 C17orf102A2RUQ5 167 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 TREHO43280 583 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 CYP3A7P24462 503 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 Q4G0T1 1027 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 ABHD15Q6UXT9 468 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 NEK8Q86SG6 692 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 TDHQ8IZJ6 230 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 FAM184AQ8NB25 1140 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 BRMS1Q9HCU9 246 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 DDX25Q9UHL0 483 aaKnown RBP11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 WNT7AO00755 349 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 BACH1O14867 736 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 CHMP2AO43633 222 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 CCNT1O60563 726 aaKnown RBP11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 LGR5O75473 907 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 ATG7O95352 703 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 HMGN5P82970 282 aaKnown RBP11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 SWSAP1Q6NVH7 229 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 CCDC60Q8IWA6 550 aaPredicted RBP11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
CNEP1R1-205ENST00000565457 LMBR1Q8WVP7 490 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms