RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ANKRD54Q6NXT1 300 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 CCDC105Q8IYK2 499 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 DTWD2Q8NBA8 298 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 SYTL5Q8TDW5 730 aaPredicted RBP10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 RUBCNQ92622 972 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 NECTIN4Q96NY8 510 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 MLXIPQ9HAP2 919 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 EPB41L4AQ9HCS5 686 aaPredicted RBP10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 KMT2BQ9UMN6 2715 aaPredicted RBP10.59□□□□□ -0.71
VPS9D1-205ENST00000565452 RANBP6O60518 1105 aaKnown RBP10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 NMT2O60551 498 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 NR3C2P08235 984 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 STAG3L1P0CL83 205 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 TOP1P11387 765 aaKnown RBP10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 AOC1P19801 751 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 HOXC8P31273 242 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 RSPO4Q2I0M5 234 aaPredicted RBP10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 USH1GQ495M9 461 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 TPRNQ4KMQ1 711 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 KIAA0319Q5VV43 1072 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 PLCD3Q8N3E9 789 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 CYP2W1Q8TAV3 490 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 USP26Q9BXU7 913 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 NAPBQ9H115 298 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 EHMT1Q9H9B1 1298 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 SETD4Q9NVD3 440 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 LIMD1Q9UGP4 676 aa10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.72
VPS9D1-205ENST00000565452 PI15O43692 258 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 HMMRO75330 724 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 GGPS1O95749 300 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 CHRNA1P02708 482 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 HSPD1P10809 573 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 GHRP10912 638 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 NOVP48745 357 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 RBM10P98175 930 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 SYCE2Q6PIF2 218 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 ZC3H14Q6PJT7 736 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 RASGRP2Q7LDG7 609 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 NPAS4Q8IUM7 802 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 KBTBD3Q8NAB2 608 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 VN1R2Q8NFZ6 395 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 RASGRP4Q8TDF6 673 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 CHAMP1Q96JM3 812 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 APOL5Q9BWW9 433 aa10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 PUF60Q9UHX1 559 aaKnown RBP10.57□□□□□ -0.72
VPS9D1-205ENST00000565452 GREB1LQ9C091 1923 aaPredicted RBP10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 C2CD4DB7Z1M9 353 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 STK25O00506 426 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 SORBS3O60504 671 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 EIF2AK2P19525 551 aaKnown RBP10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 ITIH3Q06033 890 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 LPIN1Q14693 890 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 PAN2Q504Q3 1202 aaKnown RBP10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 ZDHHC14Q8IZN3 488 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 TMEM47Q9BQJ4 181 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 FTHL17Q9BXU8 183 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 RNF216Q9NWF9 866 aaPredicted RBP10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 TMEM260Q9NX78 707 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 MRPL11Q9Y3B7 192 aaKnown RBP10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 ABCB11O95342 1321 aa10.56□□□□□ -0.72
VPS9D1-205ENST00000565452 DNAH14Q0VDD8 3507 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 NOP56O00567 594 aaKnown RBP10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 LGALS2P05162 132 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 ASGR2P07307 311 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 MYCLP12524 364 aaPredicted RBP10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 NPR3P17342 541 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 MTHFRP42898 656 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 ERVFC1P60507 584 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 ARHGAP4P98171 946 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 KCNC3Q14003 757 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 LLGL2Q6P1M3 1020 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 TAF2Q6P1X5 1199 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 GPR161Q8N6U8 529 aaKnown RBP10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 TTC14Q96N46 770 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 ADAM7Q9H2U9 754 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 SMOC2Q9H3U7 446 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 NGRNQ9NPE2 291 aaKnown RBP10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 PXMP2Q9NR77 195 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 FBXL21Q9UKT6 434 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 LRFN2Q9ULH4 789 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 R4GN57 208 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 NRCAMQ92823 1304 aa10.55□□□□□ -0.72
VPS9D1-205ENST00000565452 DMXL1Q9Y485 3027 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 M0R2C6 588 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 FGF18O76093 207 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 PDHBP11177 359 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 ADAM17P78536 824 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 CTDSPL2Q05D32 466 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 ZNF543Q08ER8 600 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 ATAT1Q5SQI0 421 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 GPATCH4Q5T3I0 446 aaKnown RBP10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 RUFY4Q6ZNE9 571 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 TSHZ1Q6ZSZ6 1077 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms