RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 NFRKBQ6P4R8 1299 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 C7orf31Q8N865 590 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 TNPO1Q92973 898 aaKnown RBP18.07■□□□□ 0.48
RAB40C-208ENST00000564703 LENG9Q96B70 501 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 MBOAT7Q96N66 472 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 TOX2Q96NM4 488 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 SMARCAD1Q9H4L7 1026 aa18.07■□□□□ 0.48
RAB40C-208ENST00000564703 BACH1O14867 736 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 TBX3O15119 743 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 DHX15O43143 795 aaKnown RBP18.06■□□□□ 0.48
RAB40C-208ENST00000564703 SUPT20HL2P0C7V6 817 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 TRAPPC10P48553 1259 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 PTPN11Q06124 597 aaPredicted RBP18.06■□□□□ 0.48
RAB40C-208ENST00000564703 ZNF746Q6NUN9 644 aaPredicted RBP18.06■□□□□ 0.48
RAB40C-208ENST00000564703 ANKRD33Q7Z3H0 272 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 SLFN12Q8IYM2 578 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 KAT2BQ92831 832 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 SLC5A5Q92911 643 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 C16orf70Q9BSU1 422 aa18.06■□□□□ 0.48
RAB40C-208ENST00000564703 DOCK5Q9H7D0 1870 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 VPS37CA5D8V6 355 aaPredicted RBP18.05■□□□□ 0.48
RAB40C-208ENST00000564703 F2P00734 622 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 PSAPP07602 524 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 PDIA4P13667 645 aaKnown RBP18.05■□□□□ 0.48
RAB40C-208ENST00000564703 STAT5BP51692 787 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 FAM160B1Q5W0V3 765 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 SMAP1Q8IYB5 467 aaPredicted RBP18.05■□□□□ 0.48
RAB40C-208ENST00000564703 SLC43A3Q8NBI5 491 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 ERAP1Q9NZ08 941 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 NOD1Q9Y239 953 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 PCDHA10Q9Y5I2 948 aa18.05■□□□□ 0.48
RAB40C-208ENST00000564703 GRIN2DO15399 1336 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 SLC37A4O43826 429 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 NEMFO60524 1076 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 ATG7O95352 703 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 CLTBP09497 229 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 SFNP31947 248 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 MCM7P33993 719 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 ZNF174Q15697 407 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 CALCRLQ16602 461 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 TTC38Q5R3I4 469 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 SPRYD3Q8NCJ5 442 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 PRDM5Q9NQX1 630 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-208ENST00000564703 TMEM39AQ9NV64 488 aa18.04■□□□□ 0.48
RAB40C-208ENST00000564703 WDR64B1ANS9 1081 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 KIF28PB7ZC32 967 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 HAS3O00219 553 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 CHMP2AO43633 222 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 PSMD10O75832 226 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 CCNE2O96020 404 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 GNAT1P11488 350 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 SYT1P21579 422 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 JAK3P52333 1124 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 ORC2Q13416 577 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-208ENST00000564703 RILPL1Q5EBL4 403 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 SWSAP1Q6NVH7 229 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 ABHD15Q6UXT9 468 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 PLPPR4Q7Z2D5 763 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 MIER3Q7Z3K6 550 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 CKAP2LQ8IYA6 745 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 ETNPPLQ8TBG4 499 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 ZNF302Q9NR11 478 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 DISC1Q9NRI5 854 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 PCDHA12Q9UN75 941 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 TELO2Q9Y4R8 837 aa18.03■□□□□ 0.48
RAB40C-208ENST00000564703 LGR5O75473 907 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 SLC26A2P50443 739 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 SESTD1Q86VW0 696 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 TRIM50Q86XT4 487 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 FAM126BQ8IXS8 530 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 RDM1Q8NG50 284 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 GJA10Q969M2 543 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 TRPV6Q9H1D0 765 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 KCNMB3Q9NPA1 279 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
RAB40C-208ENST00000564703 ZMYND8Q9ULU4 1186 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-208ENST00000564703 EMSYQ7Z589 1322 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 MARK3P27448 753 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 TXKP42681 527 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 FAAP100Q0VG06 881 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 PTGISQ16647 500 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 PDXDC2PQ6P474 469 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 BRAPQ7Z569 592 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 PPP1R13LQ8WUF5 828 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 HAS1Q92839 578 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 LBHD1Q9BQE6 289 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-208ENST00000564703 UNC45AQ9H3U1 944 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 RNPEPQ9H4A4 650 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 PDE4DIPQ5VU43 2346 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 KAT6AQ92794 2004 aa18.01■□□□□ 0.47
RAB40C-208ENST00000564703 SCN10AQ9Y5Y9 1956 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 C17orf102A2RUQ5 167 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 H0YGN5 161 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 STX6O43752 255 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 B4GALT4O60513 344 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 CD4P01730 458 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 SMIM10L2AP0DMW4 78 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 SMIM10L2BP0DMW5 78 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 RAG1P15918 1043 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms