RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 AFAP1L1Q8TED9 768 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 HERVK_113Q902F9 699 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 ATP6V0A1Q93050 837 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 AGO4Q9HCK5 861 aaKnown RBP20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 GNAT1P11488 350 aa20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 C8orf34Q49A92 452 aa20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 FAM177A1Q8N128 213 aaPredicted RBP20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 DHX38Q92620 1227 aaKnown RBP20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 GLG1Q92896 1179 aa20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 RNPEPQ9H4A4 650 aa20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 SMARCAD1Q9H4L7 1026 aa20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 PCDHA4Q9UN74 947 aa20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 TANC1Q9C0D5 1861 aa20.88■□□□□ 0.93
SYNGR3-204ENST00000564642 FAM86B1E9PN63 330 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 FAM86B2P0C5J1 330 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 CKBP12277 381 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 ACTN1P12814 892 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 SELPP16109 830 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 XBP1P17861 261 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 HIC1Q14526 733 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 ZNF697Q5TEC3 545 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 FAM109BQ6ICB4 259 aaPredicted RBP20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 Q7L0L9 218 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 LRRC8DQ7L1W4 858 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 CRYGNQ8WXF5 182 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 FTOQ9C0B1 505 aaKnown RBP eCLIP20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 ERAP1Q9NZ08 941 aa20.87■□□□□ 0.93
SYNGR3-204ENST00000564642 PARNO95453 639 aaKnown RBP20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 SETQ01105 290 aaPredicted RBP20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 RBL2Q08999 1139 aa20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 RASIP1Q5U651 963 aa20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 GALNT17Q6IS24 598 aa20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 BLIDQ8IZY5 108 aa20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 AIFM3Q96NN9 605 aa20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 C22orf23Q9BZE7 217 aa20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 AZI2Q9H6S1 392 aa20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 SETD4Q9NVD3 440 aa20.86■□□□□ 0.93
SYNGR3-204ENST00000564642 STK36Q9NRP7 1315 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 IGLV3-22A0A075B6J6 115 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 ZBBXA8MT70 800 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 DDX39AO00148 427 aaKnown RBP20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 TREHO43280 583 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 MARK3P27448 753 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 ACTR2P61160 394 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 ITGB3BPQ13352 177 aaPredicted RBP20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 ME3Q16798 604 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 SERINC5Q86VE9 423 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 NECAB1Q8N987 351 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 ZNF577Q9BSK1 485 aa20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 CXXC1Q9P0U4 656 aaPredicted RBP20.85■□□□□ 0.93
SYNGR3-204ENST00000564642 EMSYQ7Z589 1322 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 NRCAMQ92823 1304 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 IPO5O00410 1097 aaKnown RBP20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 HOXC8P31273 242 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 CIITAP33076 1130 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 THPOP40225 353 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 USP11P51784 963 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 PRR16Q569H4 304 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 WASF1Q92558 559 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 TNPO1Q92973 898 aaKnown RBP20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 VWCEQ96DN2 955 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 MTMR10Q9NXD2 777 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 ORC3Q9UBD5 711 aaPredicted RBP20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 SLC4A7Q9Y6M7 1214 aa20.84■□□□□ 0.93
SYNGR3-204ENST00000564642 LGR5O75473 907 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 TRIM71Q2Q1W2 868 aaKnown RBP20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 ZNF618Q5T7W0 954 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 DAGLBQ8NCG7 672 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 TBCKQ8TEA7 893 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 WNT8BQ93098 351 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 FAM161BQ96MY7 647 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 UIMC1Q96RL1 719 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 TBC1D22BQ9NU19 505 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 TCEAL9Q9UHQ7 104 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 KCNJ14Q9UNX9 436 aa20.83■□□□□ 0.93
SYNGR3-204ENST00000564642 GRXCR1A8MXD5 290 aa20.82■□□□□ 0.92
SYNGR3-204ENST00000564642 LARGE1O95461 756 aa20.82■□□□□ 0.92
SYNGR3-204ENST00000564642 CTDNEP1O95476 244 aa20.82■□□□□ 0.92
SYNGR3-204ENST00000564642 STAT5BP51692 787 aa20.82■□□□□ 0.92
SYNGR3-204ENST00000564642 LMBR1Q8WVP7 490 aa20.82■□□□□ 0.92
SYNGR3-204ENST00000564642 GTF3C6Q969F1 213 aa20.82■□□□□ 0.92
SYNGR3-204ENST00000564642 PHF20Q9BVI0 1012 aa20.82■□□□□ 0.92
SYNGR3-204ENST00000564642 RSPH10B2B2RC85 870 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 M0R2N6 131 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 DTNBO60941 627 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 ATG7O95352 703 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 RSPH10BP0C881 870 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 DNAJB2P25686 324 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 PPFIA1Q13136 1202 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 NONOQ15233 471 aaKnown RBP eCLIP20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 MIS18BP1Q6P0N0 1132 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 PLPPR4Q7Z2D5 763 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 PCYT2Q99447 389 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 SEMA6BQ9H3T3 888 aa20.81■□□□□ 0.92
SYNGR3-204ENST00000564642 BACH1O14867 736 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 DHX15O43143 795 aaKnown RBP20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 NBNO60934 754 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 CAND2O75155 1236 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 CCNE2O96020 404 aa20.8■□□□□ 0.92
SYNGR3-204ENST00000564642 ADAM17P78536 824 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms