RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 BLIDQ8IZY5 108 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 NECAB1Q8N987 351 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 CYP2W1Q8TAV3 490 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 CAGE1Q8TC20 777 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 TNPO1Q92973 898 aaKnown RBP15.54■□□□□ 0.08
CNOT1-206ENST00000564557 PHF12Q96QT6 1004 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 AZI2Q9H6S1 392 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 IL23AQ9NPF7 189 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 NFASCO94856 1347 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 UMODL1Q5DID0 1318 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 GABBR2O75899 941 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 FGBP02675 491 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 ACRP10323 421 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 GTF3C6Q969F1 213 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 SCLYQ96I15 445 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 ZNF577Q9BSK1 485 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 SMARCAD1Q9H4L7 1026 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 AGO4Q9HCK5 861 aaKnown RBP15.53■□□□□ 0.08
CNOT1-206ENST00000564557 BRMS1Q9HCU9 246 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 ERAP1Q9NZ08 941 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
CNOT1-206ENST00000564557 DDX39AO00148 427 aaKnown RBP15.52■□□□□ 0.08
CNOT1-206ENST00000564557 SMIM10L2AP0DMW4 78 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 SMIM10L2BP0DMW5 78 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 RFC2P35250 354 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 USP11P51784 963 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 EPHB4P54760 987 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 PTK7Q13308 1070 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 TRIM29Q14134 588 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 PRR16Q569H4 304 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 ZNF365Q70YC5 407 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 AFAP1L1Q8TED9 768 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 ATP6V0A1Q93050 837 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 LRCH3Q96II8 777 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 AIFM3Q96NN9 605 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.52■□□□□ 0.088e-12■□□□□ 11.3
CNOT1-206ENST00000564557 FTOQ9C0B1 505 aaKnown RBP eCLIP15.52■□□□□ 0.08
CNOT1-206ENST00000564557 TBC1D22BQ9NU19 505 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 KCNJ14Q9UNX9 436 aa15.52■□□□□ 0.08
CNOT1-206ENST00000564557 DOCK5Q9H7D0 1870 aa15.52■□□□□ 0.07
CNOT1-206ENST00000564557 CCDC194A0A1B0GVG4 234 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 GSTTP1A0A1W2PQM5 241 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 FAM86B1E9PN63 330 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 IPO5O00410 1097 aaKnown RBP15.51■□□□□ 0.07
CNOT1-206ENST00000564557 SOX1O00570 391 aaPredicted RBP15.51■□□□□ 0.07
CNOT1-206ENST00000564557 PFKMP08237 780 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 FAM86B2P0C5J1 330 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 ACTN1P12814 892 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 NONOQ15233 471 aaKnown RBP eCLIP15.51■□□□□ 0.07
CNOT1-206ENST00000564557 TMEM240Q5SV17 173 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 KRT25Q7Z3Z0 450 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 TRIM50Q86XT4 487 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 DAGLBQ8NCG7 672 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 TBCKQ8TEA7 893 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 ZSCAN31Q96LW9 406 aaPredicted RBP15.51■□□□□ 0.07
CNOT1-206ENST00000564557 WNT8AQ9H1J5 351 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 RNPEPQ9H4A4 650 aa15.51■□□□□ 0.07
CNOT1-206ENST00000564557 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.5■□□□□ 0.07
CNOT1-206ENST00000564557 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.5■□□□□ 0.07
CNOT1-206ENST00000564557 ZBBXA8MT70 800 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 BACH1O14867 736 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 ADAMTS3O15072 1205 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 ST18O60284 1047 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 PARNO95453 639 aaKnown RBP15.5■□□□□ 0.07
CNOT1-206ENST00000564557 IQCF3P0C7M6 154 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 SELPP16109 830 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 MARK3P27448 753 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 ACTR2P61160 394 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
CNOT1-206ENST00000564557 RABEP1Q15276 862 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 FAM160B1Q5W0V3 765 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 OTOP2Q7RTS6 562 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 SETD4Q9NVD3 440 aa15.5■□□□□ 0.07
CNOT1-206ENST00000564557 NRCAMQ92823 1304 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 IGLV3-22A0A075B6J6 115 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 LARGE1O95461 756 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 CTDNEP1O95476 244 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 CIITAP33076 1130 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 THPOP40225 353 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 RBM25P49756 843 aaKnown RBP15.49■□□□□ 0.07
CNOT1-206ENST00000564557 STAT5BP51692 787 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 CLCN6P51797 869 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 PPFIA1Q13136 1202 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 ITGB3BPQ13352 177 aaPredicted RBP15.49■□□□□ 0.07
CNOT1-206ENST00000564557 GPR153Q6NV75 609 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 MIS18BP1Q6P0N0 1132 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 LRRC8DQ7L1W4 858 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 CRYGNQ8WXF5 182 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 UIMC1Q96RL1 719 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 PHF20Q9BVI0 1012 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
CNOT1-206ENST00000564557 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 TELO2Q9Y4R8 837 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 SAMM50Q9Y512 469 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 KAT6AQ92794 2004 aa15.49■□□□□ 0.07
CNOT1-206ENST00000564557 EMSYQ7Z589 1322 aa15.48■□□□□ 0.07
CNOT1-206ENST00000564557 MARCH6O60337 910 aa15.48■□□□□ 0.07
CNOT1-206ENST00000564557 DTNBO60941 627 aa15.48■□□□□ 0.07
CNOT1-206ENST00000564557 CKBP12277 381 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms