RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
CDR2-204ENST00000564542 BANK1Q8NDB2 785 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 SMARCC2Q8TAQ2 1214 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 CUL5Q93034 780 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 MAP3K14Q99558 947 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 TELO2Q9Y4R8 837 aa16.25■□□□□ 0.19
CDR2-204ENST00000564542 MEIS2O14770 477 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 CHMLP26374 656 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 SSTR3P32745 418 aaPredicted RBP16.24■□□□□ 0.19
CDR2-204ENST00000564542 KIF5BP33176 963 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 SP4Q02446 784 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 UTP14CQ5TAP6 766 aaKnown RBP16.24■□□□□ 0.19
CDR2-204ENST00000564542 TAF2Q6P1X5 1199 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 USP17L6PQ6QN14 398 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 RPAINQ86UA6 219 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 NLRX1Q86UT6 975 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 MB21D2Q8IYB1 491 aaPredicted RBP16.24■□□□□ 0.19
CDR2-204ENST00000564542 CTCFLQ8NI51 663 aaPredicted RBP16.24■□□□□ 0.19
CDR2-204ENST00000564542 IGDCC4Q8TDY8 1250 aa16.24■□□□□ 0.19
CDR2-204ENST00000564542 PABPC5Q96DU9 382 aaKnown RBP16.24■□□□□ 0.19
CDR2-204ENST00000564542 RRP36Q96EU6 259 aaKnown RBP16.24■□□□□ 0.19
CDR2-204ENST00000564542 NSUN3Q9H649 340 aaKnown RBP16.24■□□□□ 0.19
CDR2-204ENST00000564542 SEC63Q9UGP8 760 aaKnown RBP16.24■□□□□ 0.19
CDR2-204ENST00000564542 ATG2AQ2TAZ0 1938 aa16.23■□□□□ 0.19
CDR2-204ENST00000564542 DDAH1O94760 285 aa16.23■□□□□ 0.19
CDR2-204ENST00000564542 CHRNA1P02708 482 aa16.23■□□□□ 0.19
CDR2-204ENST00000564542 SMARCA1P28370 1054 aa16.23■□□□□ 0.19
CDR2-204ENST00000564542 TCF7P36402 384 aaPredicted RBP16.23■□□□□ 0.19
CDR2-204ENST00000564542 TCEAL5Q5H9L2 206 aa16.23■□□□□ 0.19
CDR2-204ENST00000564542 ZNF654Q8IZM8 581 aa16.23■□□□□ 0.19
CDR2-204ENST00000564542 GPRASP2Q96D09 838 aa16.23■□□□□ 0.19
CDR2-204ENST00000564542 IL17RAQ96F46 866 aa16.23■□□□□ 0.19
CDR2-204ENST00000564542 PRR33A8MZF0 331 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 C5orf67F2Z3F1 127 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 H3BQ06 376 aaPredicted RBP16.22■□□□□ 0.19
CDR2-204ENST00000564542 SGSM2O43147 1006 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 KCNA2P16389 499 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 FIBCD1Q8N539 461 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 CDHR1Q96JP9 859 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 LZTS2Q9BRK4 669 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 EHMT1Q9H9B1 1298 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 RC3H2Q9HBD1 1191 aaKnown RBP16.22■□□□□ 0.19
CDR2-204ENST00000564542 LY9Q9HBG7 655 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 FAM50BQ9Y247 325 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 RWDD3Q9Y3V2 267 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 KAT6AQ92794 2004 aa16.22■□□□□ 0.19
CDR2-204ENST00000564542 ADGRA3Q8IWK6 1321 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 LINC00271P0C7V0 271 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 GHRP10912 638 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 ALADP13716 330 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 CTNNB1P35222 781 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 MGAT3Q09327 533 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 PPFIA1Q13136 1202 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 RUFY4Q6ZNE9 571 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 RSPH3Q86UC2 560 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 MAP4K1Q92918 833 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 MTA3Q9BTC8 594 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 C11orf84Q9BUA3 381 aaPredicted RBP16.21■□□□□ 0.19
CDR2-204ENST00000564542 LMAN2LQ9H0V9 348 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 ERAP1Q9NZ08 941 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 TUBE1Q9UJT0 475 aa16.21■□□□□ 0.19
CDR2-204ENST00000564542 SUPT16HQ9Y5B9 1047 aaKnown RBP16.21■□□□□ 0.19
CDR2-204ENST00000564542 MBLAC1A4D2B0 266 aaPredicted RBP16.2■□□□□ 0.18
CDR2-204ENST00000564542 NCK2O43639 380 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 ATP9AO75110 1047 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 RB1P06400 928 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 GNAQP50148 359 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 LPIN1Q14693 890 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 GRIK4Q16099 956 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 CASC1Q6TDU7 716 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 SEPT1Q8WYJ6 367 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 CLDND1Q9NY35 253 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 PRKAG3Q9UGI9 489 aa16.2■□□□□ 0.18
CDR2-204ENST00000564542 GSTTP1A0A1W2PQM5 241 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 PLEKHA8P1O95397 391 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 RPLP2P05387 115 aaKnown RBP16.19■□□□□ 0.18
CDR2-204ENST00000564542 ITGB5P18084 799 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 MARK3P27448 753 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 BMPR1AP36894 532 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 ZP2Q05996 745 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 MTMR1Q13613 665 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 EP400NLQ6ZTU2 488 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 SRBD1Q8N5C6 995 aaKnown RBP16.19■□□□□ 0.18
CDR2-204ENST00000564542 CLP1Q92989 425 aaKnown RBP16.19■□□□□ 0.18
CDR2-204ENST00000564542 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
CDR2-204ENST00000564542 PSTPIP2Q9H939 334 aa16.19■□□□□ 0.18
CDR2-204ENST00000564542 RBM8AQ9Y5S9 174 aaKnown RBP16.19■□□□□ 0.18
CDR2-204ENST00000564542 PRC1O43663 620 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 FBXO47Q5MNV8 452 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 MARCH8Q5T0T0 291 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 TSHZ1Q6ZSZ6 1077 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 DNAJB3Q8WWF6 145 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 GLG1Q92896 1179 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 ZNF689Q96CS4 500 aaPredicted RBP16.18■□□□□ 0.18
CDR2-204ENST00000564542 TMEM87BQ96K49 555 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 SMARCAD1Q9H4L7 1026 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 UBIAD1Q9Y5Z9 338 aa16.18■□□□□ 0.18
CDR2-204ENST00000564542 TTC3P53804 2025 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms