RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PDE6AP16499 860 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 FAHP16930 419 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 AMY2BP19961 511 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 EPHA5P54756 1037 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 MCTP2Q6DN12 878 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 DBX2Q6ZNG2 339 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 ARHGAP36Q6ZRI8 547 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 ZC3H7AQ8IWR0 971 aaKnown RBP7.32□□□□□ -1.24
UBR1-205ENST00000564540 GSTCDQ8NEC7 633 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 CLIC6Q96NY7 704 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 RTEL1Q9NZ71 1219 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 HSPBP1Q9NZL4 362 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 CROTQ9UKG9 612 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 NUB1Q9Y5A7 615 aa7.32□□□□□ -1.24
UBR1-205ENST00000564540 CCDC66A2RUB6 948 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 ACOT7O00154 380 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 KRT15P19012 456 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 DNM2P50570 870 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 NFIXQ14938 502 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 TRIM61Q5EBN2 209 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 PRAMEF18Q5VWM3 479 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 C16orf59Q7L2K0 433 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 FRMD5Q7Z6J6 570 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 PTRH1Q86Y79 214 aaKnown RBP7.31□□□□□ -1.24
UBR1-205ENST00000564540 DDX1Q92499 740 aaKnown RBP7.31□□□□□ -1.24
UBR1-205ENST00000564540 MRFAP1L1Q96HT8 127 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 SCLYQ96I15 445 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 TMEM209Q96SK2 561 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 USP40Q9NVE5 1235 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 SFMBT1Q9UHJ3 866 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 SRPK3Q9UPE1 567 aa7.31□□□□□ -1.24
UBR1-205ENST00000564540 KCNK3O14649 394 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 NAT1P18440 290 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 MLLT6P55198 1093 aaPredicted RBP7.3□□□□□ -1.24
UBR1-205ENST00000564540 JAM2P57087 298 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 GJA9P57773 515 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 ST5P78524 1137 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 SQSTM1Q13501 440 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 GPR19Q15760 415 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 RGL3Q3MIN7 710 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 BRAPQ7Z569 592 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 FGD2Q7Z6J4 655 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 PDGFDQ9GZP0 370 aaPredicted RBP7.3□□□□□ -1.24
UBR1-205ENST00000564540 PIF1Q9H611 641 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 COQ6Q9Y2Z9 468 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 DUSP10Q9Y6W6 482 aa7.3□□□□□ -1.24
UBR1-205ENST00000564540 MAN2B1O00754 1011 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 PRICKLE3O43900 615 aaPredicted RBP7.29□□□□□ -1.24
UBR1-205ENST00000564540 EFCAB14O75071 495 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 CKMP06732 381 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 ZNF28P17035 718 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 CD276Q5ZPR3 534 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 VASNQ6EMK4 673 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 FERMT3Q86UX7 667 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 CISD2Q8N5K1 135 aaKnown RBP7.29□□□□□ -1.24
UBR1-205ENST00000564540 DTX3Q8N9I9 347 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 TXNDC5Q8NBS9 432 aaKnown RBP7.29□□□□□ -1.24
UBR1-205ENST00000564540 SH3TC2Q8TF17 1288 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 MAGEB10Q96LZ2 347 aaPredicted RBP7.29□□□□□ -1.24
UBR1-205ENST00000564540 NCOA5Q9HCD5 579 aaKnown RBP7.29□□□□□ -1.24
UBR1-205ENST00000564540 SMURF1Q9HCE7 757 aa7.29□□□□□ -1.24
UBR1-205ENST00000564540 CCDC163A0A0D9SF12 145 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.28□□□□□ -1.24
UBR1-205ENST00000564540 FAM90A27PA6NNH2 459 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 ZNF561-AS1K7EIQ3 104 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 FOXD2O60548 495 aaPredicted RBP7.28□□□□□ -1.24
UBR1-205ENST00000564540 RAPGEF3O95398 923 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 PTPN1P18031 435 aaKnown RBP7.28□□□□□ -1.24
UBR1-205ENST00000564540 IL13P35225 146 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 CRY1Q16526 586 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 FAM47CQ5HY64 1035 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 BTBD8Q5XKL5 378 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 ZCCHC14Q8WYQ9 949 aaKnown RBP7.28□□□□□ -1.24
UBR1-205ENST00000564540 TEPSINQ96N21 525 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 MRPL4Q9BYD3 311 aaKnown RBP7.28□□□□□ -1.24
UBR1-205ENST00000564540 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 RIC8BQ9NVN3 520 aa7.28□□□□□ -1.24
UBR1-205ENST00000564540 TCRBV16S1A1N1A0A5B0 115 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 KCNQ2O43526 872 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 GLRBP48167 497 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 PFKPQ01813 784 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 SKIDA1Q1XH10 827 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 FAM26FQ5R3K3 315 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 ABHD17CQ6PCB6 329 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 NLGN4XQ8N0W4 816 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 CLUHP3Q96NS8 147 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 L2HGDHQ9H9P8 463 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 DLL4Q9NR61 685 aa7.27□□□□□ -1.25
UBR1-205ENST00000564540 GSTA4O15217 222 aa7.26□□□□□ -1.25
UBR1-205ENST00000564540 KCNA6P17658 529 aa7.26□□□□□ -1.25
UBR1-205ENST00000564540 CNR2P34972 360 aa7.26□□□□□ -1.25
UBR1-205ENST00000564540 FIGNQ5HY92 759 aa7.26□□□□□ -1.25
UBR1-205ENST00000564540 FSTL4Q6MZW2 842 aa7.26□□□□□ -1.25
UBR1-205ENST00000564540 TRMT10BQ6PF06 316 aaKnown RBP7.26□□□□□ -1.25
UBR1-205ENST00000564540 SLC39A2Q9NP94 309 aa7.26□□□□□ -1.25
UBR1-205ENST00000564540 ATP23Q9Y6H3 246 aa7.26□□□□□ -1.25
UBR1-205ENST00000564540 MROH6A6NGR9 719 aa7.25□□□□□ -1.25
UBR1-205ENST00000564540 ZNF839A8K0R7 811 aa7.25□□□□□ -1.25
UBR1-205ENST00000564540 ENO2P09104 434 aaPredicted RBP7.25□□□□□ -1.25
UBR1-205ENST00000564540 COL6A1P12109 1028 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms