RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 TEX2Q8IWB9 1127 aa28.88■■■□□ 2.21
AC009041.3-201ENST00000564390 SETD4Q9NVD3 440 aa28.88■■■□□ 2.21
AC009041.3-201ENST00000564390 GSTTP1A0A1W2PQM5 241 aa28.87■■■□□ 2.21
AC009041.3-201ENST00000564390 ESYT2A0FGR8 921 aa28.87■■■□□ 2.21
AC009041.3-201ENST00000564390 ARP10275 920 aa28.87■■■□□ 2.21
AC009041.3-201ENST00000564390 MYOGP15173 224 aa28.87■■■□□ 2.21
AC009041.3-201ENST00000564390 IFNAR1P17181 557 aa28.87■■■□□ 2.21
AC009041.3-201ENST00000564390 ARHGAP4P98171 946 aa28.87■■■□□ 2.21
AC009041.3-201ENST00000564390 RNF26Q9BY78 433 aaPredicted RBP28.87■■■□□ 2.21
AC009041.3-201ENST00000564390 ZMYND12Q9H0C1 365 aa28.87■■■□□ 2.21
AC009041.3-201ENST00000564390 FOSL2P15408 326 aa28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 MARK3P27448 753 aa28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 THPOP40225 353 aa28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 TCTN1Q2MV58 587 aa28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 CEP55Q53EZ4 464 aa28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 CCDC12Q8WUD4 166 aaPredicted RBP28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 SEPT1Q8WYJ6 367 aa28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 C6orf50Q9HD87 102 aa28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 JPH1Q9HDC5 661 aaPredicted RBP28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 PDRG1Q9NUG6 133 aa28.86■■■□□ 2.21
AC009041.3-201ENST00000564390 PTPRSQ13332 1948 aa28.85■■■□□ 2.21
AC009041.3-201ENST00000564390 STK3Q13188 491 aa28.85■■■□□ 2.21
AC009041.3-201ENST00000564390 MBTPS1Q14703 1052 aa28.85■■■□□ 2.21
AC009041.3-201ENST00000564390 REXO1Q8N1G1 1221 aaKnown RBP28.85■■■□□ 2.21
AC009041.3-201ENST00000564390 SLC17A8Q8NDX2 589 aa28.85■■■□□ 2.21
AC009041.3-201ENST00000564390 RASGRP4Q8TDF6 673 aa28.85■■■□□ 2.21
AC009041.3-201ENST00000564390 LMBR1Q8WVP7 490 aa28.85■■■□□ 2.21
AC009041.3-201ENST00000564390 VPS54Q9P1Q0 977 aa28.85■■■□□ 2.21
AC009041.3-201ENST00000564390 MAFGO15525 162 aa28.84■■■□□ 2.21
AC009041.3-201ENST00000564390 ZNF76P36508 570 aa28.84■■■□□ 2.21
AC009041.3-201ENST00000564390 ITGB3BPQ13352 177 aaPredicted RBP28.84■■■□□ 2.21
AC009041.3-201ENST00000564390 AGO4Q9HCK5 861 aaKnown RBP28.84■■■□□ 2.21
AC009041.3-201ENST00000564390 SLC9A2Q9UBY0 812 aa28.84■■■□□ 2.21
AC009041.3-201ENST00000564390 CHD9Q3L8U1 2897 aa28.84■■■□□ 2.21
AC009041.3-201ENST00000564390 CXCL10P02778 98 aa28.83■■■□□ 2.21
AC009041.3-201ENST00000564390 CTSHP09668 335 aa28.83■■■□□ 2.21
AC009041.3-201ENST00000564390 GLG1Q92896 1179 aa28.83■■■□□ 2.21
AC009041.3-201ENST00000564390 UIMC1Q96RL1 719 aa28.83■■■□□ 2.21
AC009041.3-201ENST00000564390 SDF4Q9BRK5 362 aa28.83■■■□□ 2.21
AC009041.3-201ENST00000564390 EYSQ5T1H1 3165 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 FAM86B1E9PN63 330 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 MEIS1O00470 390 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 BAIAP3O94812 1187 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 PARNO95453 639 aaKnown RBP28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 FAM86B2P0C5J1 330 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 CNKSR3Q6P9H4 555 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 MAFAQ8NHW3 353 aaPredicted RBP28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 ZNF274Q96GC6 653 aaPredicted RBP28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 SLC9A7Q96T83 725 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 PRDM12Q9H4Q4 367 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 SLC28A3Q9HAS3 691 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 PCDHA11Q9Y5I1 949 aa28.82■■■□□ 2.2
AC009041.3-201ENST00000564390 NFASCO94856 1347 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 EMSYQ7Z589 1322 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 RSPH10B2B2RC85 870 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 DDX39AO00148 427 aaKnown RBP28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 RSPH10BP0C881 870 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 GNAT1P11488 350 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 WDR5P61964 334 aaKnown RBP28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 TMCO2Q7Z6W1 182 aaPredicted RBP28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 CCDC148Q8NFR7 591 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 CRYGNQ8WXF5 182 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 PCYT2Q99447 389 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 ERAP1Q9NZ08 941 aa28.81■■■□□ 2.2
AC009041.3-201ENST00000564390 CPLX1O14810 134 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 GNA11P29992 359 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 KCNJ6P48051 423 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 ACTR2P61160 394 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 ADAM17P78536 824 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 SSRP1Q08945 709 aaKnown RBP28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 PPFIA1Q13136 1202 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 PPP2R2DQ66LE6 453 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 PLA2G4DQ86XP0 818 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 TRIM22Q8IYM9 498 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 SMARCAD1Q9H4L7 1026 aa28.8■■■□□ 2.2
AC009041.3-201ENST00000564390 NRCAMQ92823 1304 aa28.79■■■□□ 2.2
AC009041.3-201ENST00000564390 IGLV3-22A0A075B6J6 115 aa28.79■■■□□ 2.2
AC009041.3-201ENST00000564390 DEFB103AP81534 67 aa28.79■■■□□ 2.2
AC009041.3-201ENST00000564390 RUFY4Q6ZNE9 571 aa28.79■■■□□ 2.2
AC009041.3-201ENST00000564390 NIPA1Q7RTP0 329 aa28.79■■■□□ 2.2
AC009041.3-201ENST00000564390 HERC6Q8IVU3 1022 aa28.79■■■□□ 2.2
AC009041.3-201ENST00000564390 OSBPL7Q9BZF2 842 aa28.79■■■□□ 2.2
AC009041.3-201ENST00000564390 LGR5O75473 907 aa28.78■■■□□ 2.2
AC009041.3-201ENST00000564390 CA3P07451 260 aa28.78■■■□□ 2.2
AC009041.3-201ENST00000564390 CYP3A4P08684 503 aa28.78■■■□□ 2.2
AC009041.3-201ENST00000564390 GRIK4Q16099 956 aa28.78■■■□□ 2.2
AC009041.3-201ENST00000564390 DTNBO60941 627 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 CCNE2O96020 404 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 NLRP5P59047 1200 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 IGBP1P78318 339 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 MCTP2Q6DN12 878 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 PHOSPHO2Q8TCD6 241 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 BICD2Q8TD16 824 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 ZBTB10Q96DT7 871 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 AIFM3Q96NN9 605 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 AZI2Q9H6S1 392 aa28.77■■■□□ 2.2
AC009041.3-201ENST00000564390 TUBE1Q9UJT0 475 aa28.76■■■□□ 2.19
AC009041.3-201ENST00000564390 SIP14410 1827 aa28.76■■■□□ 2.19
AC009041.3-201ENST00000564390 CAND2O75155 1236 aa28.75■■■□□ 2.19
AC009041.3-201ENST00000564390 ARHGEF15O94989 841 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms