RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 C8orf76Q96K31 380 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 PCYT2Q99447 389 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 RIT2Q99578 217 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 ZNF577Q9BSK1 485 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 BRMS1Q9HCU9 246 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 TRMT13Q9NUP7 481 aaKnown RBP19.64■□□□□ 0.73
USB1-209ENST00000564387 PKD2L1Q9P0L9 805 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 GTF2IRD1Q9UHL9 959 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 EMSYQ7Z589 1322 aa19.64■□□□□ 0.73
USB1-209ENST00000564387 TDP2O95551 362 aa19.63■□□□□ 0.73
USB1-209ENST00000564387 GCFC2P16383 781 aaKnown RBP19.63■□□□□ 0.73
USB1-209ENST00000564387 PIK3AP1Q6ZUJ8 805 aa19.63■□□□□ 0.73
USB1-209ENST00000564387 HDAC6Q9UBN7 1215 aa19.63■□□□□ 0.73
USB1-209ENST00000564387 SP4Q02446 784 aa19.62■□□□□ 0.73
USB1-209ENST00000564387 GDF6Q6KF10 455 aaPredicted RBP19.62■□□□□ 0.73
USB1-209ENST00000564387 ZNF746Q6NUN9 644 aaPredicted RBP19.62■□□□□ 0.73
USB1-209ENST00000564387 B3GNT9Q6UX72 402 aa19.62■□□□□ 0.73
USB1-209ENST00000564387 ABHD15Q6UXT9 468 aa19.62■□□□□ 0.73
USB1-209ENST00000564387 ETNPPLQ8TBG4 499 aa19.62■□□□□ 0.73
USB1-209ENST00000564387 NAP1L4Q99733 375 aaKnown RBP19.62■□□□□ 0.73
USB1-209ENST00000564387 NOC4LQ9BVI4 516 aaKnown RBP19.62■□□□□ 0.73
USB1-209ENST00000564387 PRDM5Q9NQX1 630 aaPredicted RBP19.62■□□□□ 0.73
USB1-209ENST00000564387 COLQQ9Y215 455 aaPredicted RBP19.62■□□□□ 0.73
USB1-209ENST00000564387 FAM205CA6NFA0 338 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 PSMD10O75832 226 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 RAG1P15918 1043 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 ADAM17P78536 824 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 HIC1Q14526 733 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 CHRDL2Q6WN34 429 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 PLPPR4Q7Z2D5 763 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 TRIM50Q86XT4 487 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 C7orf31Q8N865 590 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 PPP1R13LQ8WUF5 828 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 BADQ92934 168 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 FOXP1Q9H334 677 aaPredicted RBP19.61■□□□□ 0.73
USB1-209ENST00000564387 SMARCAD1Q9H4L7 1026 aa19.61■□□□□ 0.73
USB1-209ENST00000564387 ZNF215Q9UL58 517 aaPredicted RBP19.61■□□□□ 0.73
USB1-209ENST00000564387 A0A1W2PPC1 479 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 SLC37A4O43826 429 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 KRT76Q01546 638 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 RBL2Q08999 1139 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 PTGISQ16647 500 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 LETM2Q2VYF4 491 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 FAM47CQ5HY64 1035 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 MFSD5Q6N075 450 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 SMAP1Q8IYB5 467 aaPredicted RBP19.6■□□□□ 0.73
USB1-209ENST00000564387 AFAP1L1Q8TED9 768 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 LBHD1Q9BQE6 289 aaPredicted RBP19.6■□□□□ 0.73
USB1-209ENST00000564387 RNPEPQ9H4A4 650 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 KCNMB3Q9NPA1 279 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 ERAP1Q9NZ08 941 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 PCDH10Q9P2E7 1040 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 KIF3AQ9Y496 699 aa19.6■□□□□ 0.73
USB1-209ENST00000564387 TBX3O15119 743 aa19.59■□□□□ 0.73
USB1-209ENST00000564387 SMIM10L2AP0DMW4 78 aa19.59■□□□□ 0.73
USB1-209ENST00000564387 SMIM10L2BP0DMW5 78 aa19.59■□□□□ 0.73
USB1-209ENST00000564387 U2AF2P26368 475 aaKnown RBP eCLIP19.59■□□□□ 0.73
USB1-209ENST00000564387 MDM2Q00987 491 aaPredicted RBP19.59■□□□□ 0.73
USB1-209ENST00000564387 SAFBQ15424 915 aaKnown RBP eCLIP19.59■□□□□ 0.73
USB1-209ENST00000564387 UTP14CQ5TAP6 766 aaKnown RBP19.59■□□□□ 0.73
USB1-209ENST00000564387 SNX21Q969T3 373 aa19.59■□□□□ 0.73
USB1-209ENST00000564387 FAM20AQ96MK3 541 aa19.59■□□□□ 0.73
USB1-209ENST00000564387 HIPK3Q9H422 1215 aa19.59■□□□□ 0.73
USB1-209ENST00000564387 DDX25Q9UHL0 483 aaKnown RBP19.59■□□□□ 0.73
USB1-209ENST00000564387 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.59■□□□□ 0.73
USB1-209ENST00000564387 PITPNM1O00562 1244 aa19.58■□□□□ 0.72
USB1-209ENST00000564387 CYP2C9P11712 490 aa19.58■□□□□ 0.72
USB1-209ENST00000564387 GJB2P29033 226 aa19.58■□□□□ 0.72
USB1-209ENST00000564387 SLC26A2P50443 739 aa19.58■□□□□ 0.72
USB1-209ENST00000564387 FOSBP53539 338 aa19.58■□□□□ 0.72
USB1-209ENST00000564387 GUCY1B3Q02153 619 aa19.58■□□□□ 0.72
USB1-209ENST00000564387 PTK7Q13308 1070 aa19.58■□□□□ 0.72
USB1-209ENST00000564387 DHX38Q92620 1227 aaKnown RBP19.58■□□□□ 0.72
USB1-209ENST00000564387 PCDHA10Q9Y5I2 948 aa19.58■□□□□ 0.72
USB1-209ENST00000564387 UMODL1Q5DID0 1318 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 NRCAMQ92823 1304 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 DDX39AO00148 427 aaKnown RBP19.57■□□□□ 0.72
USB1-209ENST00000564387 CCNT1O60563 726 aaKnown RBP19.57■□□□□ 0.72
USB1-209ENST00000564387 STAT5BP51692 787 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 CHMP4BP1P59074 171 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 TRIM71Q2Q1W2 868 aaKnown RBP19.57■□□□□ 0.72
USB1-209ENST00000564387 LRCH2Q5VUJ6 765 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 MIS18BP1Q6P0N0 1132 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 SERINC5Q86VE9 423 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 RDM1Q8NG50 284 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 HAS1Q92839 578 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 GLG1Q92896 1179 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 UIMC1Q96RL1 719 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 WNT8AQ9H1J5 351 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 AZI2Q9H6S1 392 aa19.57■□□□□ 0.72
USB1-209ENST00000564387 MAFBQ9Y5Q3 323 aaPredicted RBP19.57■□□□□ 0.72
USB1-209ENST00000564387 C17orf102A2RUQ5 167 aa19.56■□□□□ 0.72
USB1-209ENST00000564387 WNT7AO00755 349 aa19.56■□□□□ 0.72
USB1-209ENST00000564387 GAS7O60861 476 aa19.56■□□□□ 0.72
USB1-209ENST00000564387 SFNP31947 248 aa19.56■□□□□ 0.72
USB1-209ENST00000564387 CYP2C18P33260 490 aa19.56■□□□□ 0.72
USB1-209ENST00000564387 ZNF200P98182 395 aaPredicted RBP19.56■□□□□ 0.72
USB1-209ENST00000564387 NOSTRINQ8IVI9 506 aa19.56■□□□□ 0.72
USB1-209ENST00000564387 CCDC60Q8IWA6 550 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms