RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ZNF618Q5T7W0 954 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 RNF26Q9BY78 433 aaPredicted RBP22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 RNPEPQ9H4A4 650 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 SETD4Q9NVD3 440 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 MSRAQ9UJ68 235 aa22.81■■□□□ 1.24
SHCBP1-203ENST00000564272 ARP10275 920 aa22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 ARHGAP4P98171 946 aa22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 CEP55Q53EZ4 464 aa22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 CCDC12Q8WUD4 166 aaPredicted RBP22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 SEPT1Q8WYJ6 367 aa22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 ZMYND12Q9H0C1 365 aa22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 C6orf50Q9HD87 102 aa22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 JPH1Q9HDC5 661 aaPredicted RBP22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 PDRG1Q9NUG6 133 aa22.8■■□□□ 1.24
SHCBP1-203ENST00000564272 MAFGO15525 162 aa22.79■■□□□ 1.24
SHCBP1-203ENST00000564272 MYOGP15173 224 aa22.79■■□□□ 1.24
SHCBP1-203ENST00000564272 THPOP40225 353 aa22.79■■□□□ 1.24
SHCBP1-203ENST00000564272 MBTPS1Q14703 1052 aa22.79■■□□□ 1.24
SHCBP1-203ENST00000564272 TCTN1Q2MV58 587 aa22.79■■□□□ 1.24
SHCBP1-203ENST00000564272 LMBR1Q8WVP7 490 aa22.79■■□□□ 1.24
SHCBP1-203ENST00000564272 AGO4Q9HCK5 861 aaKnown RBP22.79■■□□□ 1.24
SHCBP1-203ENST00000564272 VPS54Q9P1Q0 977 aa22.79■■□□□ 1.24
SHCBP1-203ENST00000564272 CXCL10P02778 98 aa22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 FOSL2P15408 326 aa22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 MARK3P27448 753 aa22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 ZNF76P36508 570 aa22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 STK3Q13188 491 aa22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 ITGB3BPQ13352 177 aaPredicted RBP22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 REXO1Q8N1G1 1221 aaKnown RBP22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 RASGRP4Q8TDF6 673 aa22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 SLC9A2Q9UBY0 812 aa22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 CDH23Q9H251 3354 aa22.78■■□□□ 1.24
SHCBP1-203ENST00000564272 PTPRSQ13332 1948 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 FAM86B1E9PN63 330 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 MEIS1O00470 390 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 BAIAP3O94812 1187 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 PARNO95453 639 aaKnown RBP22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 FAM86B2P0C5J1 330 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 CNKSR3Q6P9H4 555 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 SLC17A8Q8NDX2 589 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 GLG1Q92896 1179 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 ZNF274Q96GC6 653 aaPredicted RBP22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 SLC9A7Q96T83 725 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 SDF4Q9BRK5 362 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 NFASCO94856 1347 aa22.77■■□□□ 1.24
SHCBP1-203ENST00000564272 CTSHP09668 335 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 GNAT1P11488 350 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 GNA11P29992 359 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 ADAM17P78536 824 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 CCDC148Q8NFR7 591 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 MAFAQ8NHW3 353 aaPredicted RBP22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 CRYGNQ8WXF5 182 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 PCYT2Q99447 389 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 ERAP1Q9NZ08 941 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 PCDHA11Q9Y5I1 949 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 EMSYQ7Z589 1322 aa22.76■■□□□ 1.23
SHCBP1-203ENST00000564272 RSPH10B2B2RC85 870 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 CPLX1O14810 134 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 CYP3A4P08684 503 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 RSPH10BP0C881 870 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 ACTR2P61160 394 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 WDR5P61964 334 aaKnown RBP22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 SSRP1Q08945 709 aaKnown RBP22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 PPFIA1Q13136 1202 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 NIPA1Q7RTP0 329 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 PLA2G4DQ86XP0 818 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 TRIM22Q8IYM9 498 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 UIMC1Q96RL1 719 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 SMARCAD1Q9H4L7 1026 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 PRDM12Q9H4Q4 367 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 SLC28A3Q9HAS3 691 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 CHD9Q3L8U1 2897 aa22.75■■□□□ 1.23
SHCBP1-203ENST00000564272 KAT6AQ92794 2004 aa22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 IGLV3-22A0A075B6J6 115 aa22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 DDX39AO00148 427 aaKnown RBP22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 LGR5O75473 907 aa22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 KCNJ6P48051 423 aa22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 PPP2R2DQ66LE6 453 aa22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 RUFY4Q6ZNE9 571 aa22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 HERC6Q8IVU3 1022 aa22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 NRCAMQ92823 1304 aa22.74■■□□□ 1.23
SHCBP1-203ENST00000564272 CCNE2O96020 404 aa22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 DEFB103AP81534 67 aa22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 GRIK4Q16099 956 aa22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 MCTP2Q6DN12 878 aa22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 TMCO2Q7Z6W1 182 aaPredicted RBP22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 PHOSPHO2Q8TCD6 241 aa22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 BICD2Q8TD16 824 aa22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 AZI2Q9H6S1 392 aa22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 SH3GLB2Q9NR46 395 aa22.73■■□□□ 1.23
SHCBP1-203ENST00000564272 CAND2O75155 1236 aa22.72■■□□□ 1.23
SHCBP1-203ENST00000564272 CA3P07451 260 aa22.72■■□□□ 1.23
SHCBP1-203ENST00000564272 NLRP5P59047 1200 aa22.72■■□□□ 1.23
SHCBP1-203ENST00000564272 ANAPC15P60006 121 aa22.72■■□□□ 1.23
SHCBP1-203ENST00000564272 AIFM3Q96NN9 605 aa22.72■■□□□ 1.23
SHCBP1-203ENST00000564272 OSBPL7Q9BZF2 842 aa22.72■■□□□ 1.23
SHCBP1-203ENST00000564272 MYO9BQ13459 2157 aa22.72■■□□□ 1.23
SHCBP1-203ENST00000564272 DEXIO95424 95 aa22.71■■□□□ 1.23
SHCBP1-203ENST00000564272 IGBP1P78318 339 aa22.71■■□□□ 1.23
SHCBP1-203ENST00000564272 SCRN1Q12765 414 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms