RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 MTMR1Q13613 665 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 KRT32Q14532 448 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 UBE2SQ16763 222 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 WWC2Q6AWC2 1192 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 TMCO2Q7Z6W1 182 aaPredicted RBP19.19■□□□□ 0.66
CCNF-203ENST00000564236 RASEFQ8IZ41 740 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 SEPT1Q8WYJ6 367 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 ZBED2Q9BTP6 218 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 CERS4Q9HA82 394 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 INSL6Q9Y581 213 aa19.19■□□□□ 0.66
CCNF-203ENST00000564236 GSTTP1A0A1W2PQM5 241 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 hCG_1642624A0A1W2PR95 340 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 MBLAC1A4D2B0 266 aaPredicted RBP19.18■□□□□ 0.66
CCNF-203ENST00000564236 LINC01553A4QN01 128 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 TNFRSF10AO00220 468 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 CDC45O75419 566 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 HMGB1P09429 215 aaKnown RBP19.18■□□□□ 0.66
CCNF-203ENST00000564236 ADCK5Q3MIX3 580 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 TYW1BQ6NUM6 668 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 TAF2Q6P1X5 1199 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.18■□□□□ 0.662e-6■■■■□ 19.7
CCNF-203ENST00000564236 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 SPRED2Q7Z698 418 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 RAB11FIP4Q86YS3 637 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 CCDC82Q8N4S0 544 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 APBB2Q92870 758 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 TGS1Q96RS0 853 aaKnown RBP19.18■□□□□ 0.66
CCNF-203ENST00000564236 EHMT1Q9H9B1 1298 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 RIC8AQ9NPQ8 531 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 FAM217BQ9NTX9 383 aaPredicted RBP19.18■□□□□ 0.66
CCNF-203ENST00000564236 BRPF3Q9ULD4 1205 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 COG5Q9UP83 839 aa19.18■□□□□ 0.66
CCNF-203ENST00000564236 ZBTB43O43298 467 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 FOSP01100 380 aaPredicted RBP19.17■□□□□ 0.66
CCNF-203ENST00000564236 AMHP03971 560 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 RTN1Q16799 776 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 AAK1Q2M2I8 961 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 UTP14CQ5TAP6 766 aaKnown RBP19.17■□□□□ 0.66
CCNF-203ENST00000564236 SKAP1Q86WV1 359 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 FBXL16Q8N461 479 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 SEPT8Q92599 483 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 ERAP1Q9NZ08 941 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 NID2Q14112 1375 aa19.17■□□□□ 0.66
CCNF-203ENST00000564236 MYO9BQ13459 2157 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 BMP1P13497 986 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 CLK2P49760 499 aaKnown RBP19.16■□□□□ 0.66
CCNF-203ENST00000564236 ADAMTS19Q8TE59 1207 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 TOP1MTQ969P6 601 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 MXRA8Q9BRK3 442 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 OSBPL7Q9BZF2 842 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 GLT8D2Q9H1C3 349 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 SMARCAD1Q9H4L7 1026 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 SUGCTQ9HAC7 445 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 BARHL2Q9NY43 387 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 NFASCO94856 1347 aa19.16■□□□□ 0.66
CCNF-203ENST00000564236 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.15■□□□□ 0.66
CCNF-203ENST00000564236 STXBP3O00186 592 aa19.15■□□□□ 0.66
CCNF-203ENST00000564236 RPLP2P05387 115 aaKnown RBP19.15■□□□□ 0.66
CCNF-203ENST00000564236 ARHGAP4P98171 946 aa19.15■□□□□ 0.66
CCNF-203ENST00000564236 MGAT3Q09327 533 aa19.15■□□□□ 0.66
CCNF-203ENST00000564236 AP3B2Q13367 1082 aa19.15■□□□□ 0.66
CCNF-203ENST00000564236 MARCH8Q5T0T0 291 aa19.15■□□□□ 0.66
CCNF-203ENST00000564236 KRT40Q6A162 431 aa19.15■□□□□ 0.66
CCNF-203ENST00000564236 MICALL1Q8N3F8 863 aa19.15■□□□□ 0.66
CCNF-203ENST00000564236 KCNH7Q9NS40 1196 aa19.15■□□□□ 0.66
CCNF-203ENST00000564236 CHRNA1P02708 482 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 CTSHP09668 335 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 SREBF1P36956 1147 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 NAPAP54920 295 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 SP4Q02446 784 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 PPFIA1Q13136 1202 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 NIPA1Q7RTP0 329 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 TCEANC2Q96MN5 208 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 SAMD11Q96NU1 681 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 UHRF1Q96T88 793 aaPredicted RBP19.14■□□□□ 0.65
CCNF-203ENST00000564236 PCYT2Q99447 389 aa19.14■□□□□ 0.65
CCNF-203ENST00000564236 JPH1Q9HDC5 661 aaPredicted RBP19.14■□□□□ 0.65
CCNF-203ENST00000564236 V9GY48 417 aaPredicted RBP19.14■□□□□ 0.65
CCNF-203ENST00000564236 PRRC2BQ5JSZ5 2229 aaKnown RBP19.14■□□□□ 0.65
CCNF-203ENST00000564236 COL4A4P53420 1690 aaPredicted RBP19.14■□□□□ 0.65
CCNF-203ENST00000564236 MEIS1O00470 390 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 ATG7O95352 703 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 CDC27P30260 824 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 ADCY7P51828 1080 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 GRIK4Q16099 956 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 CEP55Q53EZ4 464 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 RUFY4Q6ZNE9 571 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 MYOCDQ8IZQ8 938 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 CRYGNQ8WXF5 182 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 AGXT2Q9BYV1 514 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 IFIH1Q9BYX4 1025 aaKnown RBP19.13■□□□□ 0.65
CCNF-203ENST00000564236 SLC9A2Q9UBY0 812 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 TUBE1Q9UJT0 475 aa19.13■□□□□ 0.65
CCNF-203ENST00000564236 MICAL3Q7RTP6 2002 aa19.12■□□□□ 0.65
CCNF-203ENST00000564236 KLF18A0A0U1RQI7 1052 aa19.12■□□□□ 0.65
CCNF-203ENST00000564236 ESYT2A0FGR8 921 aa19.12■□□□□ 0.65
CCNF-203ENST00000564236 RRN3P2A6NIE6 340 aa19.12■□□□□ 0.65
CCNF-203ENST00000564236 GOLGA8AA7E2F4 631 aa19.12■□□□□ 0.65
CCNF-203ENST00000564236 GOLGA8BA8MQT2 603 aa19.12■□□□□ 0.65
CCNF-203ENST00000564236 TFF2Q03403 129 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms