RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ZFYVE28Q9HCC9 887 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 MGAMO43451 1857 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 SPATA31C2B4DYI2 1134 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 E9PMD0 336 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 TLR2O60603 784 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 SSBP05455 408 aaKnown RBP eCLIP24.55■■□□□ 1.52
LINC01960-201ENST00000563759 KCNA2P16389 499 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 CTTNQ14247 550 aaKnown RBP24.55■■□□□ 1.52
LINC01960-201ENST00000563759 NEK9Q8TD19 979 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 HSD17B14Q9BPX1 270 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 TRIM9Q9C026 710 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 RMND1Q9NWS8 449 aa24.55■■□□□ 1.52
LINC01960-201ENST00000563759 RPN1P04843 607 aaKnown RBP24.54■■□□□ 1.52
LINC01960-201ENST00000563759 EEPD1Q7L9B9 569 aa24.54■■□□□ 1.52
LINC01960-201ENST00000563759 PLEKHH3Q7Z736 793 aa24.54■■□□□ 1.52
LINC01960-201ENST00000563759 TPH2Q8IWU9 490 aa24.54■■□□□ 1.52
LINC01960-201ENST00000563759 ZIC5Q96T25 663 aa24.54■■□□□ 1.52
LINC01960-201ENST00000563759 LRRC27Q9C0I9 530 aa24.54■■□□□ 1.52
LINC01960-201ENST00000563759 DNM3Q9UQ16 869 aa24.54■■□□□ 1.52
LINC01960-201ENST00000563759 LOC102724159A0A0B4J2E5 919 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 ICAM3P32942 547 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 TM4SF4P48230 202 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 JAK3P52333 1124 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 ASIC1P78348 528 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 NOGQ13253 232 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 MORC3Q14149 939 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 PWP2Q15269 919 aaKnown RBP24.53■■□□□ 1.52
LINC01960-201ENST00000563759 CBX8Q9HC52 389 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 CREBZFQ9NS37 354 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 NFASCO94856 1347 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 ASB14A6NK59 587 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 WDR64B1ANS9 1081 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 GRB14Q14449 540 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 KCTD17Q8N5Z5 321 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 C7orf25Q9BPX7 421 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 LXNQ9BS40 222 aa24.53■■□□□ 1.52
LINC01960-201ENST00000563759 JPH1Q9HDC5 661 aaPredicted RBP24.53■■□□□ 1.52
LINC01960-201ENST00000563759 SLITRK3O94933 977 aa24.52■■□□□ 1.52
LINC01960-201ENST00000563759 PLA2G4BP0C869 781 aa24.52■■□□□ 1.52
LINC01960-201ENST00000563759 MUTP22033 750 aa24.52■■□□□ 1.52
LINC01960-201ENST00000563759 SFNP31947 248 aa24.52■■□□□ 1.52
LINC01960-201ENST00000563759 DEKP35659 375 aaKnown RBP24.52■■□□□ 1.52
LINC01960-201ENST00000563759 CRHR2Q13324 411 aa24.52■■□□□ 1.52
LINC01960-201ENST00000563759 ZNF746Q6NUN9 644 aaPredicted RBP24.52■■□□□ 1.52
LINC01960-201ENST00000563759 DPP9Q86TI2 863 aa24.52■■□□□ 1.52
LINC01960-201ENST00000563759 LUZP1Q86V48 1076 aa24.52■■□□□ 1.52
LINC01960-201ENST00000563759 BANK1Q8NDB2 785 aa24.52■■□□□ 1.52
LINC01960-201ENST00000563759 BMP6P22004 513 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 DEFB115Q30KQ5 88 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 CCDC47Q96A33 483 aaKnown RBP24.51■■□□□ 1.51
LINC01960-201ENST00000563759 DACH1Q9UI36 760 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 MYH11P35749 1972 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 MYMKA6NI61 221 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 COBLO75128 1261 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 ECM2O94769 699 aaPredicted RBP24.51■■□□□ 1.51
LINC01960-201ENST00000563759 CCNE2O96020 404 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 XRCC6P12956 609 aaKnown RBP eCLIP24.51■■□□□ 1.51
LINC01960-201ENST00000563759 APLP1P51693 650 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 PSMC6P62333 389 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 ZNF792Q3KQV3 632 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 C17orf99Q6UX52 265 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 SLC9A2Q9UBY0 812 aa24.51■■□□□ 1.51
LINC01960-201ENST00000563759 SP4Q02446 784 aa24.5■■□□□ 1.51
LINC01960-201ENST00000563759 DYMQ7RTS9 669 aa24.5■■□□□ 1.51
LINC01960-201ENST00000563759 FBXO16Q8IX29 292 aaPredicted RBP24.5■■□□□ 1.51
LINC01960-201ENST00000563759 MLKLQ8NB16 471 aa24.5■■□□□ 1.51
LINC01960-201ENST00000563759 CAPNS2Q96L46 248 aa24.5■■□□□ 1.51
LINC01960-201ENST00000563759 RASSF10A6NK89 507 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 BECN2A8MW95 431 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 SORBS3O60504 671 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 P4HBP07237 508 aaKnown RBP24.49■■□□□ 1.51
LINC01960-201ENST00000563759 UBA1P22314 1058 aaKnown RBP24.49■■□□□ 1.51
LINC01960-201ENST00000563759 KMT5BQ4FZB7 885 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 ARMCX2Q7L311 632 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 GPBP1Q86WP2 473 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 SMAP1Q8IYB5 467 aaPredicted RBP24.49■■□□□ 1.51
LINC01960-201ENST00000563759 RDM1Q8NG50 284 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 MORC4Q8TE76 937 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 DDX12PQ92771 950 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 SENP7Q9BQF6 1050 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 BMP2KQ9NSY1 1161 aaPredicted RBP24.49■■□□□ 1.51
LINC01960-201ENST00000563759 EXOC1Q9NV70 894 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 SLC15A5A6NIM6 579 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 ALDH1A1P00352 501 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 SLC12A3P55017 1021 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 KCNB1Q14721 858 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 GIMAP8Q8ND71 665 aaPredicted RBP24.49■■□□□ 1.51
LINC01960-201ENST00000563759 PIGOQ8TEQ8 1089 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 BPIFA3Q9BQP9 254 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 BHMT2Q9H2M3 363 aa24.49■■□□□ 1.51
LINC01960-201ENST00000563759 ARID2Q68CP9 1835 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 GOLGA6L19H0YKK7 550 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 CA12O43570 354 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 KLRC4O43908 158 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 EYA4O95677 639 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 TGFB3P10600 412 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 QARSP47897 775 aaKnown RBP24.48■■□□□ 1.51
LINC01960-201ENST00000563759 SP2Q02086 613 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 UVSSAQ2YD98 709 aa24.48■■□□□ 1.51
LINC01960-201ENST00000563759 CYFIP1Q7L576 1253 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms