RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 JDP2Q8WYK2 163 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 DNAJC7Q99615 494 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 MLXIPQ9HAP2 919 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 MAD2L2Q9UI95 211 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 REXO2Q9Y3B8 237 aaKnown RBP11.43□□□□□ -0.58
RNF40-204ENST00000563683 DAGLAQ9Y4D2 1042 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 CETN2P41208 172 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 TTC19Q6DKK2 380 aaPredicted RBP11.43□□□□□ -0.58
RNF40-204ENST00000563683 PTF1AQ7RTS3 328 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 PIGOQ8TEQ8 1089 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 TDRD3Q9H7E2 651 aaKnown RBP11.43□□□□□ -0.58
RNF40-204ENST00000563683 MTMR4Q9NYA4 1195 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 CTTNBP2NLQ9P2B4 639 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
RNF40-204ENST00000563683 TNS2Q63HR2 1409 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 GOLGA6L7A0A1B0GV03 622 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 GH2P01242 217 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 BMP3P12645 472 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 SF3A3Q12874 501 aaKnown RBP eCLIP11.43□□□□□ -0.583e-6■■■■■ 31.7
RNF40-204ENST00000563683 PLCB4Q15147 1175 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 KCTD16Q68DU8 428 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 SPZ1Q9BXG8 430 aa11.43□□□□□ -0.58
RNF40-204ENST00000563683 MYBL2P10244 700 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 ALAS1P13196 640 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 EEF2P13639 858 aaKnown RBP11.42□□□□□ -0.58
RNF40-204ENST00000563683 ATP1A2P50993 1020 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 LRRC63Q05C16 580 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 ODR4Q5SWX8 454 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 LRCH2Q5VUJ6 765 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 CCDC50Q8IVM0 306 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 CHURC1Q8WUH1 139 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 CAPN11Q9UMQ6 739 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 RAD17O75943 681 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 HARSP12081 509 aaKnown RBP11.42□□□□□ -0.58
RNF40-204ENST00000563683 CRKP46108 304 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 NNTQ13423 1086 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 KCNB1Q14721 858 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 QRICH1Q2TAL8 776 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 RC3H1Q5TC82 1133 aaKnown RBP11.42□□□□□ -0.58
RNF40-204ENST00000563683 PPP4R3AQ6IN85 833 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 KRT12Q99456 494 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 IL17RBQ9NRM6 502 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 POTEFA5A3E0 1075 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 GCOM1H8Y6P7 765 aaPredicted RBP11.42□□□□□ -0.58
RNF40-204ENST00000563683 hCG_1984214I3L0E3 225 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 WNT7AO00755 349 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 SPOPO43791 374 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 POLR2MP0CAP2 368 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 HERVK_113P62684 666 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 GFPT1Q06210 699 aaPredicted RBP11.42□□□□□ -0.58
RNF40-204ENST00000563683 DRP2Q13474 957 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 SEPT7Q16181 437 aaKnown RBP11.42□□□□□ -0.58
RNF40-204ENST00000563683 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 POTEEQ6S8J3 1075 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 ZNF713Q8N859 430 aaPredicted RBP11.42□□□□□ -0.58
RNF40-204ENST00000563683 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 STK32BQ9NY57 414 aa11.42□□□□□ -0.58
RNF40-204ENST00000563683 SORBS3O60504 671 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 RHOBTB3O94955 611 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 FOSP01100 380 aaPredicted RBP11.41□□□□□ -0.58
RNF40-204ENST00000563683 H2AFZP0C0S5 128 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 PDHBP11177 359 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 KRT5P13647 590 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 PAK2Q13177 524 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 CTTNQ14247 550 aaKnown RBP11.41□□□□□ -0.58
RNF40-204ENST00000563683 H2AFVQ71UI9 128 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 CCDC26Q8TAB7 109 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 RAD54LQ92698 747 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 MYMKA6NI61 221 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 RNF225M0QZC1 329 aaPredicted RBP11.41□□□□□ -0.58
RNF40-204ENST00000563683 C21orf2O43822 256 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 CALRP27797 417 aaKnown RBP11.41□□□□□ -0.58
RNF40-204ENST00000563683 TTLL12Q14166 644 aaPredicted RBP11.41□□□□□ -0.58
RNF40-204ENST00000563683 LLGL1Q15334 1064 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 SLC10A5Q5PT55 438 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 ZMYND12Q9H0C1 365 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 EPN3Q9H201 632 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 EHD4Q9H223 541 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 TSKSQ9UJT2 592 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 NWD2Q9ULI1 1742 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 ZNF185O15231 689 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 PRLRP16471 622 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 COASYQ13057 564 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 PDCLQ13371 301 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 TMED8Q6PL24 325 aaPredicted RBP11.41□□□□□ -0.58
RNF40-204ENST00000563683 KRT27Q7Z3Y8 459 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 GIMAP8Q8ND71 665 aaPredicted RBP11.41□□□□□ -0.58
RNF40-204ENST00000563683 CAVIN3Q969G5 261 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 CCDC127Q96BQ5 260 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 EPB41L5Q9HCM4 733 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 GGA2Q9UJY4 613 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
RNF40-204ENST00000563683 GJA3Q9Y6H8 435 aa11.41□□□□□ -0.58
RNF40-204ENST00000563683 PVALEFA0A1B0GWK0 134 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 NCK2O43639 380 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 PRPHP41219 470 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms