RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SENP7Q9BQF6 1050 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 CFHR5Q9BXR6 569 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 CUEDC2Q9H467 287 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 KBTBD4Q9NVX7 518 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 RNF186Q9NXI6 227 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 STK17AQ9UEE5 414 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 TUBE1Q9UJT0 475 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 GJD2Q9UKL4 321 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 TELO2Q9Y4R8 837 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 A0A087WWV3 80 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 TNPO2O14787 897 aaKnown RBP11.39□□□□□ -0.59
SMG1-208ENST00000563448 ARIH2O95376 493 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 KRT76Q01546 638 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 DPYDQ12882 1025 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 CTTNQ14247 550 aaKnown RBP11.39□□□□□ -0.59
SMG1-208ENST00000563448 MCM6Q14566 821 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 GSE1Q14687 1217 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 LARP4BQ92615 738 aaKnown RBP11.39□□□□□ -0.59
SMG1-208ENST00000563448 RAD54LQ92698 747 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 ARHGAP39Q9C0H5 1083 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 KATNBL1Q9H079 304 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 MAGEF1Q9HAY2 307 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 TUFT1Q9NNX1 390 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 HOOK1Q9UJC3 728 aaKnown RBP11.39□□□□□ -0.59
SMG1-208ENST00000563448 PCDHA5Q9Y5H7 936 aa11.39□□□□□ -0.59
SMG1-208ENST00000563448 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 SORBS3O60504 671 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 TRPA1O75762 1119 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 SNAI1O95863 264 aaPredicted RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 HOXC6P09630 235 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 TGFB3P10600 412 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 UBA1P22314 1058 aaKnown RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 SARSP49591 514 aaKnown RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 PSMC6P62333 389 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 LACTBP83111 547 aaPredicted RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 TYRO3Q06418 890 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 CUL4BQ13620 913 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 LY6KQ17RY6 165 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 ZNF746Q6NUN9 644 aaPredicted RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 TAPT1Q6NXT6 567 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 SASS6Q6UVJ0 657 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 CYFIP1Q7L576 1253 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 BANK1Q8NDB2 785 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 CCDC34Q96HJ3 373 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 TINF2Q9BSI4 451 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 BLZF1Q9H2G9 400 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 SLC5A4Q9NY91 659 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 FLRT1Q9NZU1 646 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 WRAP73Q9P2S5 460 aaPredicted RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 SLC9A2Q9UBY0 812 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 DDX41Q9UJV9 622 aaKnown RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 SYNGAP1Q96PV0 1343 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 SFNP31947 248 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 JAK3P52333 1124 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 CAP1Q01518 475 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 TMEM63BQ5T3F8 832 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 NT5DC1Q5TFE4 455 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 CCDC62Q6P9F0 684 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 KCNV1Q6PIU1 500 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 SV2BQ7L1I2 683 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 TPH2Q8IWU9 490 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 SPATA20Q8TB22 786 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 NEK9Q8TD19 979 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 TSPY26PQ9H489 355 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 JPH1Q9HDC5 661 aaPredicted RBP11.38□□□□□ -0.59
SMG1-208ENST00000563448 VTA1Q9NP79 307 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
SMG1-208ENST00000563448 RBM47A0AV96 593 aaKnown RBP11.37□□□□□ -0.59
SMG1-208ENST00000563448 WDR64B1ANS9 1081 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
SMG1-208ENST00000563448 CCDC192P0DO97 292 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 CYP2B6P20813 491 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 MUTP22033 750 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 RGS2P41220 211 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 PSMC4P43686 418 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 FCGRTP55899 365 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 NEDD9Q14511 834 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 DHX8Q14562 1220 aaKnown RBP11.37□□□□□ -0.59
SMG1-208ENST00000563448 CCL14Q16627 93 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 MSL3Q8N5Y2 521 aaKnown RBP11.37□□□□□ -0.59
SMG1-208ENST00000563448 GIMAP8Q8ND71 665 aaPredicted RBP11.37□□□□□ -0.59
SMG1-208ENST00000563448 RDM1Q8NG50 284 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 SMARCE1Q969G3 411 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 TCEAL9Q9UHQ7 104 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 PCDHA10Q9Y5I2 948 aa11.37□□□□□ -0.59
SMG1-208ENST00000563448 BIN1O00499 593 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
SMG1-208ENST00000563448 ATG7O95352 703 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 GGPS1O95749 300 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 PLA2G4BP0C869 781 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 ACTR2P61160 394 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 SP4Q02446 784 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 SP3Q02447 781 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 UGCGQ16739 394 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 ISM2Q6H9L7 571 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms