RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 NAP1L4Q99733 375 aaKnown RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 EPC1Q9H2F5 836 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 PZPP20742 1482 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 SPDYE3A6NKU9 549 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 CALB2P22676 271 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 TNFRSF8P28908 595 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 PPARGP37231 505 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 LRRC8BQ6P9F7 803 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 PALM2Q8IXS6 379 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 TRPC4APQ8TEL6 797 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 SLC39A2Q9NP94 309 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 FAM187AA6NFU0 413 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 PDLIM1O00151 329 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 RBM5P52756 815 aaKnown RBP eCLIP6.74□□□□□ -1.33
CLK3-212ENST00000563418 PMS2P54278 862 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 LIN9Q5TKA1 542 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 RBM46Q8TBY0 533 aaKnown RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 TSPAN18Q96SJ8 248 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 LRRC2Q9BYS8 371 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 RAD21L1Q9H4I0 556 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 BIN2Q9UBW5 565 aaPredicted RBP6.74□□□□□ -1.33
CLK3-212ENST00000563418 LZTS1Q9Y250 596 aa6.74□□□□□ -1.33
CLK3-212ENST00000563418 CDK13Q14004 1512 aaKnown RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 FANCD2Q9BXW9 1451 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 RNF113AO15541 343 aaKnown RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 GUCY1B2O75343 617 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 OATP04181 439 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 BCRP11274 1271 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PGM1P36871 562 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 SPDYCQ5MJ68 293 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 ELOA2Q8IYF1 753 aaPredicted RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 FAM133AQ8N9E0 248 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PHKBQ93100 1093 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 ROPN1BQ9BZX4 212 aaPredicted RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 ROPN1Q9HAT0 212 aaPredicted RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 PCDHA5Q9Y5H7 936 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 MAD1L1Q9Y6D9 718 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 BCORL1Q5H9F3 1711 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 JAK2O60674 1132 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 KIF11P52732 1056 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PDE4DQ08499 809 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 SPIDRQ14159 915 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 RSPH1Q8WYR4 309 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 CHAMP1Q96JM3 812 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PRMT1Q99873 361 aaKnown RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 ANKFY1Q9P2R3 1169 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 TTI1O43156 1089 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PLTPP55058 493 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 TRAF7Q6Q0C0 670 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 TLK2Q86UE8 772 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 CENPTQ96BT3 561 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 BUB1O43683 1085 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 GGT6Q6P531 493 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 FOXR1Q6PIV2 292 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 SCAIQ8N9R8 606 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 GDAP1Q8TB36 358 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 FAM161BQ96MY7 647 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 TMEM165Q9HC07 324 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 FAM207AQ9NSI2 230 aaPredicted RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 PAG1Q9NWQ8 432 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 RSL24D1Q9UHA3 163 aaKnown RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 EEF1B2P24534 225 aaKnown RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 SKIV2L2P42285 1042 aaKnown RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 RASSF7Q02833 373 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 KRT40Q6A162 431 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 MTHFD1LQ6UB35 978 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 ZBED2Q9BTP6 218 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 LRWD1Q9UFC0 647 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 ADGRL2O95490 1459 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 TDRD9Q8NDG6 1382 aaKnown RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 EXOC1LA0A1B0GW35 172 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 CCDC162PA2VCL2 907 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 CPA1P15085 419 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 RNF169Q8NCN4 708 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 INPP5DQ92835 1189 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 OTUD5Q96G74 571 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 ANKRD36BP1Q96IX9 119 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 CEP19Q96LK0 163 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 FUCA2Q9BTY2 467 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 CNNM1Q9NRU3 951 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 TRPC5Q9UL62 973 aaPredicted RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 ATP10AO60312 1499 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PHF20L1A8MW92 1017 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 UBTFL6P0CB48 400 aaPredicted RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 ATP1A3P13637 1013 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PRLRP16471 622 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PTK2BQ14289 1009 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 RGS9BPQ6ZS82 235 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 MARK2Q7KZI7 788 aaKnown RBP6.73□□□□□ -1.33
CLK3-212ENST00000563418 TRAPPC11Q7Z392 1133 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 TUBGCP2Q9BSJ2 902 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PLGRKTQ9HBL7 147 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 BABAM1Q9NWV8 329 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 TRAF5O00463 557 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 GGPS1O95749 300 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 BAG3O95817 575 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 PAX3P23760 479 aa6.73□□□□□ -1.33
CLK3-212ENST00000563418 TRMT5Q32P41 509 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms