RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CHADLQ6NUI6 762 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 DNERQ8NFT8 737 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 GPRASP2Q96D09 838 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 IFNKQ9P0W0 207 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 RWDD2AQ9UIY3 292 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 SYNRGQ9UMZ2 1314 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 DCAF8L1A6NGE4 600 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 PDHXO00330 501 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 ZBTB39O15060 712 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 PAK1Q13153 545 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 MIER3Q7Z3K6 550 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.13■□□□□ 0.81
COMMD4-208ENST00000563220 NLRX1Q86UT6 975 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 KCTD17Q8N5Z5 321 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 KIAA0895Q8NCT3 520 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 IWS1Q96ST2 819 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 SLC39A2Q9NP94 309 aa20.13■□□□□ 0.81
COMMD4-208ENST00000563220 BMP2KQ9NSY1 1161 aaPredicted RBP20.13■□□□□ 0.81
COMMD4-208ENST00000563220 SOWAHBA6NEL2 793 aa20.12■□□□□ 0.81
COMMD4-208ENST00000563220 EYA4O95677 639 aa20.12■□□□□ 0.81
COMMD4-208ENST00000563220 PTMAP06454 111 aaKnown RBP20.12■□□□□ 0.81
COMMD4-208ENST00000563220 PIGOQ8TEQ8 1089 aa20.12■□□□□ 0.81
COMMD4-208ENST00000563220 XPO4Q9C0E2 1151 aaKnown RBP20.12■□□□□ 0.81
COMMD4-208ENST00000563220 BHMT2Q9H2M3 363 aa20.12■□□□□ 0.81
COMMD4-208ENST00000563220 PNMA3Q9UL41 463 aa20.12■□□□□ 0.81
COMMD4-208ENST00000563220 POTEB2H3BUK9 544 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 MAFGO15525 162 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 MUTP22033 750 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 CDC25BP30305 580 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 ALDH5A1P51649 535 aaPredicted RBP20.11■□□□□ 0.81
COMMD4-208ENST00000563220 PMS1P54277 932 aaKnown RBP20.11■□□□□ 0.81
COMMD4-208ENST00000563220 ERVK-9P63128 1117 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 ERVK-24P63145 666 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 CACNB1Q02641 598 aaPredicted RBP20.11■□□□□ 0.81
COMMD4-208ENST00000563220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.11■□□□□ 0.81
COMMD4-208ENST00000563220 FAM133AQ8N9E0 248 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 BANK1Q8NDB2 785 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 SLC45A1Q9Y2W3 748 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 RAD51AP2Q09MP3 1159 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 COASYQ13057 564 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 LXNQ9BS40 222 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 BCAS3Q9H6U6 928 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 PANK4Q9NVE7 773 aa20.11■□□□□ 0.81
COMMD4-208ENST00000563220 STAM2O75886 525 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 CCNE2O96020 404 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 ZBTB48P10074 688 aaPredicted RBP20.1■□□□□ 0.81
COMMD4-208ENST00000563220 KCNA2P16389 499 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 COPB2P35606 906 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 GIT2Q14161 759 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 STXBP2Q15833 593 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 COBLL1Q53SF7 1204 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 ANKRD23Q86SG2 305 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 DRC7Q8IY82 874 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 NAP1L5Q96NT1 182 aaPredicted RBP20.1■□□□□ 0.81
COMMD4-208ENST00000563220 PTPN18Q99952 460 aa20.1■□□□□ 0.81
COMMD4-208ENST00000563220 GTPBP4Q9BZE4 634 aaKnown RBP20.1■□□□□ 0.81
COMMD4-208ENST00000563220 TRIM49BA6NDI0 452 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 SPATA31C2B4DYI2 1134 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 SERPINC1P01008 464 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 P4HBP07237 508 aaKnown RBP20.09■□□□□ 0.81
COMMD4-208ENST00000563220 HUNKP57058 714 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 STIM1Q13586 685 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 CDKAL1Q5VV42 579 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 NEK9Q8TD19 979 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 DHTKD1Q96HY7 919 aaPredicted RBP20.09■□□□□ 0.81
COMMD4-208ENST00000563220 NACC1Q96RE7 527 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 PORCNQ9H237 461 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 NRBP1Q9UHY1 535 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 LCTP09848 1927 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 FRMD3A2A2Y4 597 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 EIF3JO75822 258 aaKnown RBP20.09■□□□□ 0.81
COMMD4-208ENST00000563220 PGK2P07205 417 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 CDK11BP21127 795 aaKnown RBP20.09■□□□□ 0.81
COMMD4-208ENST00000563220 EDNRBP24530 442 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 UBASH3AP57075 661 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 PSMD2Q13200 908 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 RINT1Q6NUQ1 792 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 ZSCAN30Q86W11 494 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 GLIS3Q8NEA6 775 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 SMCR8Q8TEV9 937 aaPredicted RBP20.09■□□□□ 0.81
COMMD4-208ENST00000563220 GTF3C2Q8WUA4 911 aaPredicted RBP20.09■□□□□ 0.81
COMMD4-208ENST00000563220 RUSC1Q9BVN2 902 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 SAMM50Q9Y512 469 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 PCDHA2Q9Y5H9 948 aa20.09■□□□□ 0.81
COMMD4-208ENST00000563220 PSMA7O14818 248 aa20.08■□□□□ 0.81
COMMD4-208ENST00000563220 KRT18P05783 430 aaKnown RBP20.08■□□□□ 0.81
COMMD4-208ENST00000563220 CCDC65Q8IXS2 484 aa20.08■□□□□ 0.81
COMMD4-208ENST00000563220 FGD4Q96M96 766 aa20.08■□□□□ 0.81
COMMD4-208ENST00000563220 MROH8Q9H579 483 aa20.08■□□□□ 0.81
COMMD4-208ENST00000563220 EFCC1Q9HA90 598 aa20.08■□□□□ 0.81
COMMD4-208ENST00000563220 CCNE1P24864 410 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 KRT76Q01546 638 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 SP2Q02086 613 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 TPD52L1Q16890 204 aaPredicted RBP20.07■□□□□ 0.8
COMMD4-208ENST00000563220 GNPTABQ3T906 1256 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 TTI2Q6NXR4 508 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 ANKRD13CQ8N6S4 541 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 GPRC5AQ8NFJ5 357 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 CDHR1Q96JP9 859 aa20.07■□□□□ 0.8
COMMD4-208ENST00000563220 ZNF830Q96NB3 372 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms