RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CETPP11597 493 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 HARSP12081 509 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 SCP2P22307 547 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 TTLL4Q14679 1199 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 CNOT6LQ96LI5 555 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 RIT2Q99578 217 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 CRACR2AQ9BSW2 395 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 EMILIN3Q9NT22 766 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 KCND2Q9NZV8 630 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 ABT1Q9ULW3 272 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 IPO5O00410 1097 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 SHMT1P34896 483 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 STAT1P42224 750 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 QARSP47897 775 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 KLHL30Q0D2K2 578 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 CCDC122Q5T0U0 273 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 RNF168Q8IYW5 571 aaPredicted RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 CTNNBL1Q8WYA6 563 aaPredicted RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 CEP63Q96MT8 703 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 KMT5AQ9NQR1 393 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 LRRIQ4A6NIV6 560 aa8.27□□□□□ -1.08
TCF4-216ENST00000562680 CTNNA2P26232 953 aa8.27□□□□□ -1.08
TCF4-216ENST00000562680 PSMC5P62195 406 aa8.27□□□□□ -1.08
TCF4-216ENST00000562680 SLFN12LQ6IEE8 588 aa8.27□□□□□ -1.08
TCF4-216ENST00000562680 PAF1Q8N7H5 531 aa8.27□□□□□ -1.08
TCF4-216ENST00000562680 NAP1L3Q99457 506 aaPredicted RBP8.27□□□□□ -1.08
TCF4-216ENST00000562680 TUBGCP2Q9BSJ2 902 aa8.27□□□□□ -1.08
TCF4-216ENST00000562680 MIS12Q9H081 205 aa8.27□□□□□ -1.08
TCF4-216ENST00000562680 KIAA1683Q9H0B3 1180 aa8.27□□□□□ -1.08
TCF4-216ENST00000562680 TBC1D12O60347 775 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 TNNC2P02585 160 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 MUTP22033 750 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 NR2F2P24468 414 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 BPIFB4P59827 614 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 ARID5AQ03989 594 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 ZKSCAN8Q15776 578 aaPredicted RBP8.27□□□□□ -1.09
TCF4-216ENST00000562680 CHAMP1Q96JM3 812 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 BHMT2Q9H2M3 363 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 KIAA1586Q9HCI6 787 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 DUOX1Q9NRD9 1551 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 ICAM1P05362 532 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 MAGEA1P43355 309 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 NTRK3Q16288 839 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 KMT5BQ4FZB7 885 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 HNRNPDLO14979 420 aaKnown RBP8.27□□□□□ -1.09
TCF4-216ENST00000562680 SLU7O95391 586 aaKnown RBP8.27□□□□□ -1.09
TCF4-216ENST00000562680 FGRP09769 529 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 ATF7P17544 494 aaPredicted RBP8.27□□□□□ -1.09
TCF4-216ENST00000562680 ACTN2P35609 894 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 CYP2J2P51589 502 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 BMS1Q14692 1282 aaKnown RBP8.27□□□□□ -1.09
TCF4-216ENST00000562680 GUF1Q8N442 669 aaKnown RBP8.27□□□□□ -1.09
TCF4-216ENST00000562680 METTL13Q8N6R0 699 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 MMP19Q99542 508 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 C1orf112Q9NSG2 853 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 IRAK4Q9NWZ3 460 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 TMEM260Q9NX78 707 aa8.27□□□□□ -1.09
TCF4-216ENST00000562680 TNNI1P19237 187 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 HOXD10P28358 340 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 FXR2P51116 673 aaKnown RBP eCLIP8.26□□□□□ -1.09
TCF4-216ENST00000562680 BACE1P56817 501 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 SLC20A2Q08357 652 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 POTEDQ86YR6 584 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 MKL1Q969V6 931 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 SENP2Q9HC62 589 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 RASAL2Q9UJF2 1139 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.26□□□□□ -1.09
TCF4-216ENST00000562680 DDTLA6NHG4 134 aaPredicted RBP8.26□□□□□ -1.09
TCF4-216ENST00000562680 CXCL11O14625 94 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 EYA4O95677 639 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 YARSP54577 528 aaKnown RBP8.26□□□□□ -1.09
TCF4-216ENST00000562680 USP50Q70EL3 339 aaPredicted RBP8.26□□□□□ -1.09
TCF4-216ENST00000562680 FAM186BQ8IYM0 893 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 SUGCTQ9HAC7 445 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 ATP6V0A4Q9HBG4 840 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 COL22A1Q8NFW1 1626 aaPredicted RBP8.26□□□□□ -1.09
TCF4-216ENST00000562680 SHTN1A0MZ66 631 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 ZBTB22O15209 634 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 TDP2O95551 362 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 KRT5P13647 590 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 EPHX2P34913 555 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 OAZ1P54368 228 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 SHC4Q6S5L8 630 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 SYCE1Q8N0S2 351 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 PCDHA10Q9Y5I2 948 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 WNT10BO00744 389 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 LDHAP00338 332 aaKnown RBP8.26□□□□□ -1.09
TCF4-216ENST00000562680 KIAA0753Q2KHM9 967 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 POMGNT1Q8WZA1 660 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 UIMC1Q96RL1 719 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 LSM14BQ9BX40 385 aaKnown RBP8.26□□□□□ -1.09
TCF4-216ENST00000562680 INO80BQ9C086 356 aaPredicted RBP8.26□□□□□ -1.09
TCF4-216ENST00000562680 SUFUQ9UMX1 484 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 GNAT1P11488 350 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 SNAP25P60880 206 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 EXOC3L4Q17RC7 722 aa8.26□□□□□ -1.09
TCF4-216ENST00000562680 C11orf57Q6ZUT1 292 aaPredicted RBP8.26□□□□□ -1.09
TCF4-216ENST00000562680 GUCA1BQ9UMX6 200 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms