RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMG1-206ENST00000562668 TMEFF2Q9UIK5 374 aaPredicted RBP6.78□□□□□ -1.32
SMG1-206ENST00000562668 PALD1Q9ULE6 856 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 X6R8D5 127 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 CAMSAP1Q5T5Y3 1602 aa6.78□□□□□ -1.32
SMG1-206ENST00000562668 IQGAP3Q86VI3 1631 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 CPP00450 1065 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 THBS2P35442 1172 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 ETFBP38117 255 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 GFRA1P56159 465 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 PLP2Q04941 152 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 EFEMP1Q12805 493 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 PRSS53Q2L4Q9 553 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 ZNF761Q86XN6 746 aaPredicted RBP6.77□□□□□ -1.33
SMG1-206ENST00000562668 FAM126BQ8IXS8 530 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 PPIL6Q8IXY8 311 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 KREMEN2Q8NCW0 462 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 TRMT2BQ96GJ1 504 aaKnown RBP6.77□□□□□ -1.33
SMG1-206ENST00000562668 C11orf84Q9BUA3 381 aaPredicted RBP6.77□□□□□ -1.33
SMG1-206ENST00000562668 LNPKQ9C0E8 428 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 FBXL7Q9UJT9 491 aa6.77□□□□□ -1.33
SMG1-206ENST00000562668 ARID4BQ4LE39 1312 aaPredicted RBP6.76□□□□□ -1.33
SMG1-206ENST00000562668 KIF3BO15066 747 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 CNR2P34972 360 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 BCL6P41182 706 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 KCNJ6P48051 423 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 NFKB2Q00653 900 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 SPATS1Q496A3 300 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 FERMT3Q86UX7 667 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 FAM26EQ8N5C1 309 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 MICAL1Q8TDZ2 1067 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 ADAMTS17Q8TE56 1095 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 TMEM169Q96HH4 297 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 CCDC140Q96MF4 163 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 ZNF408Q9H9D4 720 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 CNOT11Q9UKZ1 510 aaKnown RBP6.76□□□□□ -1.33
SMG1-206ENST00000562668 COA3Q9Y2R0 106 aaPredicted RBP6.76□□□□□ -1.33
SMG1-206ENST00000562668 CNTLNQ9NXG0 1405 aa6.76□□□□□ -1.33
SMG1-206ENST00000562668 TET3O43151 1660 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 ARNTLO00327 626 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 ADRB1P08588 477 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 RPL13P26373 211 aaKnown RBP6.75□□□□□ -1.33
SMG1-206ENST00000562668 LTBRP36941 435 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 SF1Q15637 639 aaKnown RBP6.75□□□□□ -1.33
SMG1-206ENST00000562668 SLC10A6Q3KNW5 377 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 CD300LDQ6UXZ3 194 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 CEP68Q76N32 757 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 EEPD1Q7L9B9 569 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 MILR1Q7Z6M3 343 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 KYQ8NBH2 561 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 RCBTB1Q8NDN9 531 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 SYT3Q9BQG1 590 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 EPN3Q9H201 632 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 ZNF652Q9Y2D9 606 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 DUSP10Q9Y6W6 482 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 EFCAB6Q5THR3 1501 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 ARHGAP31Q2M1Z3 1444 aa6.75□□□□□ -1.33
SMG1-206ENST00000562668 E9PCH4 1651 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 PREX1Q8TCU6 1659 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 SPATA31D1Q6ZQQ2 1576 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 PZPP20742 1482 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 ZMYM3Q14202 1370 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 K7ESM1 405 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 GJB6O95452 261 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 ITGA1P56199 1179 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 CHRNA2Q15822 529 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 GGT6Q6P531 493 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 DBX2Q6ZNG2 339 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 TTLL6Q8N841 843 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 TMEM145Q8NBT3 493 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 DDX1Q92499 740 aaKnown RBP6.74□□□□□ -1.33
SMG1-206ENST00000562668 C1orf159Q96HA4 380 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 NGRNQ9NPE2 291 aaKnown RBP6.74□□□□□ -1.33
SMG1-206ENST00000562668 JAG2Q9Y219 1238 aa6.74□□□□□ -1.33
SMG1-206ENST00000562668 H7BY64 318 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 STAT5AP42229 794 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 ARID5AQ03989 594 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 FAM26FQ5R3K3 315 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 DENND5AQ6IQ26 1287 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 MCF2L2Q86YR7 1114 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 BORCS6Q96GS4 357 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 YIPF4Q9BSR8 244 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 PCDHA2Q9Y5H9 948 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 NPATQ14207 1427 aa6.73□□□□□ -1.33
SMG1-206ENST00000562668 MYO3AQ8NEV4 1616 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 ZNF142P52746 1687 aaPredicted RBP6.72□□□□□ -1.33
SMG1-206ENST00000562668 AGRPO00253 132 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 LCP1P13796 627 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 LSAMPQ13449 338 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 CR1LQ2VPA4 569 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 EMC4Q5J8M3 183 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 SLC35F1Q5T1Q4 408 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 PCDHB4Q9Y5E5 795 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 SETD5Q9C0A6 1442 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 SYNMO15061 1565 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 ERVK-7P63135 1459 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 LMTK3Q96Q04 1460 aa6.72□□□□□ -1.33
SMG1-206ENST00000562668 NOS1P29475 1434 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms