RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC02249-202ENST00000562624 SBF2Q86WG5 1849 aa7.51□□□□□ -1.21
LINC02249-202ENST00000562624 LAMB4A4D0S4 1761 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 CCDC169A6NNP5 214 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 GOLGA8KD6RF30 607 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 KIF3CO14782 793 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 ASIC1P78348 528 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 JAG1P78504 1218 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 PPIL2Q13356 520 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 STXBP2Q15833 593 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 MYSM1Q5VVJ2 828 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 SLC30A10Q6XR72 485 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 PPP1R13LQ8WUF5 828 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 FERMT2Q96AC1 680 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 CLIC6Q96NY7 704 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 CCDC113Q9H0I3 377 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 MMRN2Q9H8L6 949 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 EMILIN3Q9NT22 766 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 GUCA1BQ9UMX6 200 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 MAPK8IP1Q9UQF2 711 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 ZDHHC9Q9Y397 364 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 SNCAIPQ9Y6H5 919 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 SHANK3Q9BYB0 1731 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 FAM205CA6NFA0 338 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 TACC1O75410 805 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 FCGRTP55899 365 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 CNTN2Q02246 1040 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 SARM1Q6SZW1 724 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 BRAPQ7Z569 592 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 RPUSD2Q8IZ73 545 aaKnown RBP7.5□□□□□ -1.21
LINC02249-202ENST00000562624 MTMR14Q8NCE2 650 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 L3MBTL3Q96JM7 780 aaPredicted RBP7.5□□□□□ -1.21
LINC02249-202ENST00000562624 USP28Q96RU2 1077 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 TMEM106CQ9BVX2 250 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 CDC23Q9UJX2 597 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 SPDYE5A6NIY4 337 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 RNF40O75150 1001 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 NR1I2O75469 434 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 FOSP01100 380 aaPredicted RBP7.5□□□□□ -1.21
LINC02249-202ENST00000562624 MYL3P08590 195 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 GYS2P54840 703 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 NLRP12P59046 1061 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 PFKFB3Q16875 520 aaPredicted RBP7.5□□□□□ -1.21
LINC02249-202ENST00000562624 MFSD14CQ5VZR4 134 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 SAPCD2Q86UD0 394 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 CAPZA3Q96KX2 299 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 FAM49AQ9H0Q0 323 aaPredicted RBP7.5□□□□□ -1.21
LINC02249-202ENST00000562624 MAD2L2Q9UI95 211 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 UBR3Q6ZT12 1888 aa7.5□□□□□ -1.21
LINC02249-202ENST00000562624 ANKRD65E5RJM6 399 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 VWA5AO00534 786 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 TXNP10599 105 aaKnown RBP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ATN1P54259 1190 aaPredicted RBP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 SP3Q02447 781 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 MTMR1Q13613 665 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 CCDC6Q16204 474 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ARMC2Q8NEN0 867 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 FBF1Q8TES7 1133 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 TAAR1Q96RJ0 339 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 KIF2CQ99661 725 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 NUCKS1Q9H1E3 243 aaKnown RBP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 N4BP2Q86UW6 1770 aaPredicted RBP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ZC3H4Q9UPT8 1303 aaKnown RBP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 CCND2P30279 289 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 PRAMEF19Q5SWL8 479 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 FKBP15Q5T1M5 1219 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 KRI1Q8N9T8 703 aaKnown RBP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 TBC1D31Q96DN5 1066 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 IFT74Q96LB3 600 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 AGTPBP1Q9UPW5 1226 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ARHGEF35A5YM69 484 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ALDH1A1P00352 501 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 PCK1P35558 622 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ERVK-9P63128 1117 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ERVK-24P63145 666 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 FKBP1BP68106 108 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ARHGAP4P98171 946 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 KIF5AQ12840 1032 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 SLC9C1Q4G0N8 1177 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 XKR9Q5GH70 373 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 SND1Q7KZF4 910 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 PLEKHH3Q7Z736 793 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 SLC24A3Q9HC58 644 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 PRDM5Q9NQX1 630 aaPredicted RBP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 SAMD15Q9P1V8 674 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 FAM169AQ9Y6X4 670 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 PITPNM2Q9BZ72 1349 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 POLR2DO15514 142 aaKnown RBP7.49□□□□□ -1.21
LINC02249-202ENST00000562624 TDP2O95551 362 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 MMP1P03956 469 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 NR3C2P08235 984 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 ELNP15502 786 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 SEC23AQ15436 765 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 GNASQ5JWF2 1037 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 TCERG1LQ5VWI1 586 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 NKX2-3Q8TAU0 364 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 MIPOL1Q8TD10 442 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 SH3GL3Q99963 347 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 BARHL2Q9NY43 387 aa7.49□□□□□ -1.21
LINC02249-202ENST00000562624 PCDHB6Q9Y5E3 794 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms