RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 TRIM43Q96BQ3 446 aaPredicted RBP18.62■□□□□ 0.57
PKD1-226ENST00000562425 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
PKD1-226ENST00000562425 NAP1L4Q99733 375 aaKnown RBP18.62■□□□□ 0.57
PKD1-226ENST00000562425 C16orf70Q9BSU1 422 aa18.62■□□□□ 0.57
PKD1-226ENST00000562425 TRPV6Q9H1D0 765 aa18.62■□□□□ 0.57
PKD1-226ENST00000562425 TUT1Q9H6E5 874 aaKnown RBP18.62■□□□□ 0.57
PKD1-226ENST00000562425 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
PKD1-226ENST00000562425 NOD1Q9Y239 953 aa18.62■□□□□ 0.57
PKD1-226ENST00000562425 MYH7BA7E2Y1 1941 aa18.62■□□□□ 0.57
PKD1-226ENST00000562425 B4GALT4O60513 344 aa18.61■□□□□ 0.57
PKD1-226ENST00000562425 MMP1P03956 469 aa18.61■□□□□ 0.57
PKD1-226ENST00000562425 INF2Q27J81 1249 aa18.61■□□□□ 0.57
PKD1-226ENST00000562425 UTP14CQ5TAP6 766 aaKnown RBP18.61■□□□□ 0.57
PKD1-226ENST00000562425 ZNF697Q5TEC3 545 aa18.61■□□□□ 0.57
PKD1-226ENST00000562425 C8orf76Q96K31 380 aa18.61■□□□□ 0.57
PKD1-226ENST00000562425 GUCD1Q96NT3 240 aa18.61■□□□□ 0.57
PKD1-226ENST00000562425 CYP3A7-CYP3A51PA0A087WV96 503 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 GSTTP1A0A1W2PQM5 241 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 TIMP1P01033 207 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 GCFC2P16383 781 aaKnown RBP18.6■□□□□ 0.57
PKD1-226ENST00000562425 CYP3A7P24462 503 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 ITGB3BPQ13352 177 aaPredicted RBP18.6■□□□□ 0.57
PKD1-226ENST00000562425 Q4G0T1 1027 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 PIK3AP1Q6ZUJ8 805 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 NEK8Q86SG6 692 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.6■□□□□ 0.57
PKD1-226ENST00000562425 OXER1Q8TDS5 423 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 SMARCAD1Q9H4L7 1026 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 AZI2Q9H6S1 392 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 TRMT13Q9NUP7 481 aaKnown RBP18.6■□□□□ 0.57
PKD1-226ENST00000562425 SCN10AQ9Y5Y9 1956 aa18.6■□□□□ 0.57
PKD1-226ENST00000562425 FOSBP53539 338 aa18.59■□□□□ 0.57
PKD1-226ENST00000562425 ACTR2P61160 394 aa18.59■□□□□ 0.57
PKD1-226ENST00000562425 PTGISQ16647 500 aa18.59■□□□□ 0.57
PKD1-226ENST00000562425 DIS3L2Q8IYB7 885 aaKnown RBP18.59■□□□□ 0.57
PKD1-226ENST00000562425 GLG1Q92896 1179 aa18.59■□□□□ 0.57
PKD1-226ENST00000562425 BADQ92934 168 aa18.59■□□□□ 0.57
PKD1-226ENST00000562425 TNPO1Q92973 898 aaKnown RBP18.59■□□□□ 0.57
PKD1-226ENST00000562425 HDAC6Q9UBN7 1215 aa18.59■□□□□ 0.57
PKD1-226ENST00000562425 GTF2IRD1Q9UHL9 959 aa18.59■□□□□ 0.57
PKD1-226ENST00000562425 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.59■□□□□ 0.57
PKD1-226ENST00000562425 PRUNE2Q8WUY3 3088 aa18.59■□□□□ 0.57
PKD1-226ENST00000562425 DHX15O43143 795 aaKnown RBP18.58■□□□□ 0.56
PKD1-226ENST00000562425 CD2BP2O95400 341 aaKnown RBP18.58■□□□□ 0.56
PKD1-226ENST00000562425 GNAT1P11488 350 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 KRT76Q01546 638 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 NR5A1Q13285 461 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 LETM2Q2VYF4 491 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 PPP4R3AQ6IN85 833 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 TMEM199Q8N511 208 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 FBXO18Q8NFZ0 1043 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 LENG9Q96B70 501 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 RIT2Q99578 217 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 HIPK3Q9H422 1215 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 ERAP1Q9NZ08 941 aa18.58■□□□□ 0.56
PKD1-226ENST00000562425 EMSYQ7Z589 1322 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 BTBD18B2RXH4 712 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 DDX39AO00148 427 aaKnown RBP18.57■□□□□ 0.56
PKD1-226ENST00000562425 MSH4O15457 936 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 EDIL3O43854 480 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 LGR5O75473 907 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 ATG7O95352 703 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 TDP2O95551 362 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 BFSP2Q13515 415 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 GNL2Q13823 731 aaKnown RBP18.57■□□□□ 0.56
PKD1-226ENST00000562425 FAM160B1Q5W0V3 765 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 GDF6Q6KF10 455 aaPredicted RBP18.57■□□□□ 0.56
PKD1-226ENST00000562425 MFSD5Q6N075 450 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 ZNF746Q6NUN9 644 aaPredicted RBP18.57■□□□□ 0.56
PKD1-226ENST00000562425 MIS18BP1Q6P0N0 1132 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 SMAP1Q8IYB5 467 aaPredicted RBP18.57■□□□□ 0.56
PKD1-226ENST00000562425 CCDC155Q8N6L0 562 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 PPP1R13LQ8WUF5 828 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 MBOAT7Q96N66 472 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 PPP1R12CQ9BZL4 782 aa18.57■□□□□ 0.56
PKD1-226ENST00000562425 DDX25Q9UHL0 483 aaKnown RBP18.57■□□□□ 0.56
PKD1-226ENST00000562425 EYSQ5T1H1 3165 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 C17orf102A2RUQ5 167 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 GAS7O60861 476 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 CYP2C9P11712 490 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 ITGB8P26012 769 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 SLC26A2P50443 739 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 STAT5BP51692 787 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 SMAD3P84022 425 aaKnown RBP18.56■□□□□ 0.56
PKD1-226ENST00000562425 GUCY1B3Q02153 619 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 FPGSQ05932 587 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 LRCH2Q5VUJ6 765 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 PLPPR4Q7Z2D5 763 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 TRIM50Q86XT4 487 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 RETREG2Q8NC44 543 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 SLC5A5Q92911 643 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 TNFRSF25Q93038 417 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 NOC4LQ9BVI4 516 aaKnown RBP18.56■□□□□ 0.56
PKD1-226ENST00000562425 TEKT3Q9BXF9 490 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 SMC3Q9UQE7 1217 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 TELO2Q9Y4R8 837 aa18.56■□□□□ 0.56
PKD1-226ENST00000562425 BACH1O14867 736 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 MARCH6O60337 910 aa18.55■□□□□ 0.56
PKD1-226ENST00000562425 CCNT1O60563 726 aaKnown RBP18.55■□□□□ 0.56
PKD1-226ENST00000562425 CCNE2O96020 404 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms