RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SYT1P21579 422 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 KRT76Q01546 638 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 MLLT1Q03111 559 aaPredicted RBP15.2■□□□□ 0.02
CDH1-204ENST00000562118 PPP2R5CQ13362 524 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 ITGA7Q13683 1181 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 FAM126BQ8IXS8 530 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 C4orf32Q8N8J7 132 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 RDM1Q8NG50 284 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 FERMT2Q96AC1 680 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 CTAGE1Q96RT6 745 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 KATNAL1Q9BW62 490 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 CEP290O15078 2479 aa15.2■□□□□ 0.02
CDH1-204ENST00000562118 IGSF9BQ9UPX0 1349 aa15.19■□□□□ 0.02
CDH1-204ENST00000562118 CCNT1O60563 726 aaKnown RBP15.19■□□□□ 0.02
CDH1-204ENST00000562118 MYL3P08590 195 aa15.19■□□□□ 0.02
CDH1-204ENST00000562118 ZNF286BP0CG31 522 aa15.19■□□□□ 0.02
CDH1-204ENST00000562118 TCF7P36402 384 aaPredicted RBP15.19■□□□□ 0.02
CDH1-204ENST00000562118 RTP1P59025 263 aa15.19■□□□□ 0.02
CDH1-204ENST00000562118 PLPPR4Q7Z2D5 763 aa15.19■□□□□ 0.02
CDH1-204ENST00000562118 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
CDH1-204ENST00000562118 MTMR6Q9Y217 621 aa15.19■□□□□ 0.02
CDH1-204ENST00000562118 ARID2Q68CP9 1835 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 H3BRB1 525 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 NOP56O00567 594 aaKnown RBP15.18■□□□□ 0.02
CDH1-204ENST00000562118 SUPT20HL2P0C7V6 817 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 SFNP31947 248 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 PSEN2P49810 448 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 PSMC6P62333 389 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 ADAM17P78536 824 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 RESTQ13127 1097 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 MFSD10Q14728 455 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 TRIM60Q495X7 471 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 RILPL1Q5EBL4 403 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 LRCH2Q5VUJ6 765 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 BRAPQ7Z569 592 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 TUT1Q9H6E5 874 aaKnown RBP15.18■□□□□ 0.02
CDH1-204ENST00000562118 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.18■□□□□ 0.02
CDH1-204ENST00000562118 PKD2L1Q9P0L9 805 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 TBX21Q9UL17 535 aa15.18■□□□□ 0.02
CDH1-204ENST00000562118 MAFBQ9Y5Q3 323 aaPredicted RBP15.18■□□□□ 0.02
CDH1-204ENST00000562118 KAT6AQ92794 2004 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 WDR64B1ANS9 1081 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 H3BQV1 296 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 SORBS3O60504 671 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 NEMFO60524 1076 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 GAS7O60861 476 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
CDH1-204ENST00000562118 SLC26A2P50443 739 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 ATN1P54259 1190 aaPredicted RBP15.17■□□□□ 0.02
CDH1-204ENST00000562118 RBL2Q08999 1139 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 FAAP100Q0VG06 881 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 TTC38Q5R3I4 469 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 TRIM50Q86XT4 487 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 CCDC60Q8IWA6 550 aaPredicted RBP15.17■□□□□ 0.02
CDH1-204ENST00000562118 SLFN12Q8IYM2 578 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 TEKT3Q9BXF9 490 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 TMEM60Q9H2L4 133 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 UNC45AQ9H3U1 944 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 PDLIM7Q9NR12 457 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 GTF2IRD1Q9UHL9 959 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 PCDHA10Q9Y5I2 948 aa15.17■□□□□ 0.02
CDH1-204ENST00000562118 MORC2Q9Y6X9 1032 aaPredicted RBP15.17■□□□□ 0.02
CDH1-204ENST00000562118 SIP14410 1827 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 KIAA0355O15063 1070 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 STX6O43752 255 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 JAK3P52333 1124 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 TLE2Q04725 743 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 HIC1Q14526 733 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 KIAA0753Q2KHM9 967 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 GJA10Q969M2 543 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 SMARCAD1Q9H4L7 1026 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 ERAP1Q9NZ08 941 aa15.16■□□□□ 0.02
CDH1-204ENST00000562118 ZNF215Q9UL58 517 aaPredicted RBP15.16■□□□□ 0.02
CDH1-204ENST00000562118 NOL7Q9UMY1 257 aaKnown RBP15.16■□□□□ 0.02
CDH1-204ENST00000562118 LAD1O00515 517 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 B4GALT4O60513 344 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 ATP4AP20648 1035 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 DDIT3P35638 169 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 PRPHP41219 470 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 CALCRLQ16602 461 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 MIS18BP1Q6P0N0 1132 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 RNPEPQ9H4A4 650 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 PCDHB6Q9Y5E3 794 aa15.15■□□□□ 0.02
CDH1-204ENST00000562118 LOXHD1Q8IVV2 1947 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 MBLAC1A4D2B0 266 aaPredicted RBP15.14■□□□□ 0.01
CDH1-204ENST00000562118 ZBTB42B2RXF5 422 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 EML1O00423 815 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 EVI5O60447 810 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 STBD1O95210 358 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 PSAPP07602 524 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 CLTBP09497 229 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 MCM7P33993 719 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 STAT5BP51692 787 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 ATP2C1P98194 919 aaPredicted RBP15.14■□□□□ 0.01
CDH1-204ENST00000562118 SP4Q02446 784 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 GNL2Q13823 731 aaKnown RBP15.14■□□□□ 0.01
CDH1-204ENST00000562118 NBR1Q14596 966 aa15.14■□□□□ 0.01
CDH1-204ENST00000562118 GDF6Q6KF10 455 aaPredicted RBP15.14■□□□□ 0.01
CDH1-204ENST00000562118 DISC1Q9NRI5 854 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms