RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 LAMA3Q16787 3333 aa8.08□□□□□ -1.12
TUBGCP4-203ENST00000562053 IGSF9BQ9UPX0 1349 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 KIF28PB7ZC32 967 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 H0YGN5 161 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 MSH4O15457 936 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 B4GALT4O60513 344 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 PPFIA4O75335 1185 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 CD4P01730 458 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 CLTBP09497 229 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 TCF7P36402 384 aaPredicted RBP8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 PSEN2P49810 448 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 ACTR2P61160 394 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 KRT76Q01546 638 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 PTPN11Q06124 597 aaPredicted RBP8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 MFSD10Q14728 455 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 SAFBQ15424 915 aaKnown RBP eCLIP8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 LETM2Q2VYF4 491 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 NBPF20Q3BBV1 942 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 PPP4R3AQ6IN85 833 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 NOSTRINQ8IVI9 506 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 SLC5A5Q92911 643 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 INTS4Q96HW7 963 aaKnown RBP8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 RIT2Q99578 217 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 NAP1L4Q99733 375 aaKnown RBP8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 ZNF577Q9BSK1 485 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 KCNMB3Q9NPA1 279 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 TBC1D22BQ9NU19 505 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 DDX25Q9UHL0 483 aaKnown RBP8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 ZNF215Q9UL58 517 aaPredicted RBP8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 SMC3Q9UQE7 1217 aa8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 TRIP12Q14669 1992 aaPredicted RBP8.07□□□□□ -1.12
TUBGCP4-203ENST00000562053 IGKV6D-21A0A0A0MT36 114 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 GSTTP1A0A1W2PQM5 241 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 DCDC2CA8MYV0 355 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 H3BRB1 525 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 DDX39AO00148 427 aaKnown RBP8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 WNT7AO00755 349 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 KIAA0355O15063 1070 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 TLR3O15455 904 aaKnown RBP8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 LGR5O75473 907 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 PSMD10O75832 226 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 U2AF2P26368 475 aaKnown RBP eCLIP8.06□□□□□ -1.123e-12■■■■□ 20.3
TUBGCP4-203ENST00000562053 FAAP100Q0VG06 881 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 KIAA0753Q2KHM9 967 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 LRCH2Q5VUJ6 765 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 ZNF746Q6NUN9 644 aaPredicted RBP8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 B3GNT9Q6UX72 402 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 HSCBQ8IWL3 235 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 SMAP1Q8IYB5 467 aaPredicted RBP8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 AFAP1L1Q8TED9 768 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 SEPT1Q8WYJ6 367 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 VTI1AQ96AJ9 217 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 CTAGE1Q96RT6 745 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 PCYT2Q99447 389 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 TUT1Q9H6E5 874 aaKnown RBP8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 PRDM5Q9NQX1 630 aaPredicted RBP8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 GTF2IRD1Q9UHL9 959 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 TCEAL9Q9UHQ7 104 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 ZMYND8Q9ULU4 1186 aaPredicted RBP8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 SCN5AQ14524 2016 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 KAT6AQ92794 2004 aa8.06□□□□□ -1.12
TUBGCP4-203ENST00000562053 TRIM43BA6NCK2 446 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 WDR64B1ANS9 1081 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 TBX3O15119 743 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 NEMFO60524 1076 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 CCNT1O60563 726 aaKnown RBP8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 GAS7O60861 476 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 ATG7O95352 703 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 SUPT20HL2P0C7V6 817 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 SYN1P17600 705 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 TRAPPC10P48553 1259 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 RBL2Q08999 1139 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 ORC2Q13416 577 aaPredicted RBP8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 FAM47CQ5HY64 1035 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 GDF6Q6KF10 455 aaPredicted RBP8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 SH3RF1Q7Z6J0 888 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 CCDC60Q8IWA6 550 aaPredicted RBP8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 C7orf31Q8N865 590 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 PPP1R13LQ8WUF5 828 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 TRIM43Q96BQ3 446 aaPredicted RBP8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 TEKT3Q9BXF9 490 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 TRPV6Q9H1D0 765 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 PRO3102Q9H379 93 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 TRMT13Q9NUP7 481 aaKnown RBP8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 ERAP1Q9NZ08 941 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 PCDH10Q9P2E7 1040 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 HDAC6Q9UBN7 1215 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 PRKAG2Q9UGJ0 569 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 VAV3Q9UKW4 847 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 LOXHD1Q8IVV2 1947 aa8.05□□□□□ -1.12
TUBGCP4-203ENST00000562053 SMIM10L2AP0DMW4 78 aa8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 SMIM10L2BP0DMW5 78 aa8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 ITGB8P26012 769 aa8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 SFNP31947 248 aa8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 MAGEA10P43363 369 aaPredicted RBP8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 SLC26A2P50443 739 aa8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 JAK3P52333 1124 aa8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 SPIRE1Q08AE8 756 aa8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 PPP2R5CQ13362 524 aa8.04□□□□□ -1.12
TUBGCP4-203ENST00000562053 GNL2Q13823 731 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms