RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 NUCB1Q02818 461 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 ASPRV1Q53RT3 343 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 UTP14CQ5TAP6 766 aaKnown RBP21.16■□□□□ 0.98
COMMD4-204ENST00000561662 KCNV1Q6PIU1 500 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 BMP8AQ7Z5Y6 402 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 RBM23Q86U06 439 aaKnown RBP21.16■□□□□ 0.98
COMMD4-204ENST00000561662 FCHSD1Q86WN1 690 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 MSLNLQ96KJ4 702 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 PCDHGC5Q9Y5F6 944 aa21.16■□□□□ 0.98
COMMD4-204ENST00000561662 ZFHX2Q9C0A1 2572 aaPredicted RBP21.15■□□□□ 0.98
COMMD4-204ENST00000561662 MMP1P03956 469 aa21.15■□□□□ 0.98
COMMD4-204ENST00000561662 RUFY4Q6ZNE9 571 aa21.15■□□□□ 0.98
COMMD4-204ENST00000561662 STOX1Q6ZVD7 989 aa21.15■□□□□ 0.98
COMMD4-204ENST00000561662 CYFIP1Q7L576 1253 aa21.15■□□□□ 0.98
COMMD4-204ENST00000561662 LMBR1Q8WVP7 490 aa21.15■□□□□ 0.98
COMMD4-204ENST00000561662 AMNQ9BXJ7 453 aa21.15■□□□□ 0.98
COMMD4-204ENST00000561662 RNF41Q9H4P4 317 aaPredicted RBP21.15■□□□□ 0.98
COMMD4-204ENST00000561662 CLEC1BQ9P126 229 aa21.15■□□□□ 0.98
COMMD4-204ENST00000561662 ZMYM6O95789 1325 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 B4E1Z4 1266 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 CAND2O75155 1236 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 CCND2P30279 289 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 IQCA1Q86XH1 822 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 FBXL6Q8N531 539 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 ENAHQ8N8S7 591 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-204ENST00000561662 CLP1Q92989 425 aaKnown RBP21.14■□□□□ 0.97
COMMD4-204ENST00000561662 ZSCAN10Q96SZ4 725 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-204ENST00000561662 RC3H2Q9HBD1 1191 aaKnown RBP21.14■□□□□ 0.97
COMMD4-204ENST00000561662 BARX2Q9UMQ3 279 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-204ENST00000561662 PLAGL2Q9UPG8 496 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 RWDD3Q9Y3V2 267 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 PCDHA1Q9Y5I3 950 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 MYO15AQ9UKN7 3530 aa21.14■□□□□ 0.97
COMMD4-204ENST00000561662 ENPP3O14638 875 aa21.13■□□□□ 0.97
COMMD4-204ENST00000561662 NRIP1P48552 1158 aa21.13■□□□□ 0.97
COMMD4-204ENST00000561662 PAN2Q504Q3 1202 aaKnown RBP21.13■□□□□ 0.97
COMMD4-204ENST00000561662 FAM26DQ5JW98 314 aa21.13■□□□□ 0.97
COMMD4-204ENST00000561662 RPGRIP1Q96KN7 1286 aa21.13■□□□□ 0.97
COMMD4-204ENST00000561662 MRPL42Q9Y6G3 142 aaKnown RBP21.13■□□□□ 0.97
COMMD4-204ENST00000561662 DOCK5Q9H7D0 1870 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 LOC730098B7Z3J9 87 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 EYA4O95677 639 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 ITGB1P05556 798 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 TGFB3P10600 412 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 GNAT1P11488 350 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 PCP11498 1178 aaKnown RBP21.12■□□□□ 0.97
COMMD4-204ENST00000561662 IBSPP21815 317 aaPredicted RBP21.12■□□□□ 0.97
COMMD4-204ENST00000561662 RBM10P98175 930 aaKnown RBP21.12■□□□□ 0.97
COMMD4-204ENST00000561662 LPIN1Q14693 890 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 ANKRD45Q5TZF3 282 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 CHD1LQ86WJ1 897 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 HOMER1Q86YM7 354 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 SMRP1Q8NCR6 262 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 ATOH1Q92858 354 aaPredicted RBP21.12■□□□□ 0.97
COMMD4-204ENST00000561662 GPR20Q99678 358 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 USP26Q9BXU7 913 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 RTEL1Q9NZ71 1219 aa21.12■□□□□ 0.97
COMMD4-204ENST00000561662 USP15Q9Y4E8 981 aaPredicted RBP21.12■□□□□ 0.97
COMMD4-204ENST00000561662 KMT2EQ8IZD2 1858 aa21.11■□□□□ 0.97
COMMD4-204ENST00000561662 ZNF213O14771 459 aa21.11■□□□□ 0.97
COMMD4-204ENST00000561662 PPFIA3O75145 1194 aa21.11■□□□□ 0.97
COMMD4-204ENST00000561662 ZNF689Q96CS4 500 aaPredicted RBP21.11■□□□□ 0.97
COMMD4-204ENST00000561662 GLP2RO95838 553 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 PDE1AP54750 535 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 ADAM17P78536 824 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 GHRHRQ02643 423 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 KLHL23Q8NBE8 558 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 SPPL3Q8TCT6 385 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 LINC01599Q8WXQ3 324 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 PRRX2Q99811 253 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 ZSWIM5Q9P217 1185 aa21.1■□□□□ 0.97
COMMD4-204ENST00000561662 CACNA1HO95180 2353 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 KLRF2D3W0D1 207 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 H0Y858 1186 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 GCOM1H8Y6P7 765 aaPredicted RBP21.09■□□□□ 0.97
COMMD4-204ENST00000561662 ZBTB5O15062 677 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 DGKIO75912 1065 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 POLR2MP0CAP2 368 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 PDE4AP27815 886 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 GATMP50440 423 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 MRPS9P82933 396 aaKnown RBP21.09■□□□□ 0.97
COMMD4-204ENST00000561662 SEMA3FQ13275 785 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 METTL7BQ6UX53 244 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 EFHBQ8N7U6 833 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 RILPL2Q969X0 211 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 ZBTB10Q96DT7 871 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 PLVAPQ9BX97 442 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 EHMT1Q9H9B1 1298 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 TLR9Q9NR96 1032 aa21.09■□□□□ 0.97
COMMD4-204ENST00000561662 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
COMMD4-204ENST00000561662 ZNF215Q9UL58 517 aaPredicted RBP21.09■□□□□ 0.97
COMMD4-204ENST00000561662 PER2O15055 1255 aa21.08■□□□□ 0.97
COMMD4-204ENST00000561662 PDGFBP01127 241 aaPredicted RBP21.08■□□□□ 0.97
COMMD4-204ENST00000561662 SP100P23497 879 aaPredicted RBP21.08■□□□□ 0.97
COMMD4-204ENST00000561662 SIGLEC14Q08ET2 396 aa21.08■□□□□ 0.97
COMMD4-204ENST00000561662 MGAT3Q09327 533 aa21.08■□□□□ 0.97
COMMD4-204ENST00000561662 COASYQ13057 564 aa21.08■□□□□ 0.97
COMMD4-204ENST00000561662 PKN1Q16512 942 aa21.08■□□□□ 0.97
COMMD4-204ENST00000561662 SLC35G1Q2M3R5 365 aa21.08■□□□□ 0.97
COMMD4-204ENST00000561662 CCDC178Q5BJE1 867 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms