RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PI4K2BG5E9Z4 385 aa29.02■■■□□ 2.24
NME3-202ENST00000561637 STAM2O75886 525 aa29.02■■■□□ 2.24
NME3-202ENST00000561637 TRAF7Q6Q0C0 670 aa29.02■■■□□ 2.24
NME3-202ENST00000561637 METTL7BQ6UX53 244 aa29.02■■■□□ 2.24
NME3-202ENST00000561637 BRF1Q92994 677 aa29.02■■■□□ 2.24
NME3-202ENST00000561637 PCDHA6Q9UN73 950 aa29.02■■■□□ 2.24
NME3-202ENST00000561637 PCDHA8Q9Y5H6 950 aa29.02■■■□□ 2.24
NME3-202ENST00000561637 STXBP3O00186 592 aa29.01■■■□□ 2.23
NME3-202ENST00000561637 ADAMTS3O15072 1205 aa29.01■■■□□ 2.23
NME3-202ENST00000561637 CKBP12277 381 aa29.01■■■□□ 2.23
NME3-202ENST00000561637 ADD1P35611 737 aaKnown RBP29.01■■■□□ 2.23
NME3-202ENST00000561637 KCNJ6P48051 423 aa29.01■■■□□ 2.23
NME3-202ENST00000561637 NAPAP54920 295 aa29.01■■■□□ 2.23
NME3-202ENST00000561637 DEFB103AP81534 67 aa29.01■■■□□ 2.23
NME3-202ENST00000561637 NOP56O00567 594 aaKnown RBP29■■■□□ 2.23
NME3-202ENST00000561637 PPFIA3O75145 1194 aa29■■■□□ 2.23
NME3-202ENST00000561637 SELPP16109 830 aa29■■■□□ 2.23
NME3-202ENST00000561637 NEDD9Q14511 834 aa29■■■□□ 2.23
NME3-202ENST00000561637 UTP14CQ5TAP6 766 aaKnown RBP29■■■□□ 2.23
NME3-202ENST00000561637 LRRC8DQ7L1W4 858 aa29■■■□□ 2.23
NME3-202ENST00000561637 CAGE1Q8TC20 777 aa29■■■□□ 2.23
NME3-202ENST00000561637 AFAP1L1Q8TED9 768 aa29■■■□□ 2.23
NME3-202ENST00000561637 SUGCTQ9HAC7 445 aa29■■■□□ 2.23
NME3-202ENST00000561637 TMEM260Q9NX78 707 aa29■■■□□ 2.23
NME3-202ENST00000561637 MTUS1Q9ULD2 1270 aa29■■■□□ 2.23
NME3-202ENST00000561637 UBIAD1Q9Y5Z9 338 aa29■■■□□ 2.23
NME3-202ENST00000561637 H3BRB1 525 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 NBNO60934 754 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 SMIM10L2AP0DMW4 78 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 SMIM10L2BP0DMW5 78 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 KCNA2P16389 499 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 RBL2Q08999 1139 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 MBTPS1Q14703 1052 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 XRRA1Q6P2D8 792 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 TUT1Q9H6E5 874 aaKnown RBP28.99■■■□□ 2.23
NME3-202ENST00000561637 LMCD1Q9NZU5 365 aa28.99■■■□□ 2.23
NME3-202ENST00000561637 SPDYE3A6NKU9 549 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 NEFLP07196 543 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 HMGB1P09429 215 aaKnown RBP28.98■■■□□ 2.23
NME3-202ENST00000561637 RPS6KB1P23443 525 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 FGD1P98174 961 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 PTK7Q13308 1070 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 ZNF618Q5T7W0 954 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 BLOC1S2Q6QNY1 142 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 NLRX1Q86UT6 975 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 CCDC155Q8N6L0 562 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 ZBED2Q9BTP6 218 aa28.98■■■□□ 2.23
NME3-202ENST00000561637 METAP2P50579 478 aaKnown RBP eCLIP28.97■■■□□ 2.23
NME3-202ENST00000561637 CYP2W1Q8TAV3 490 aa28.97■■■□□ 2.23
NME3-202ENST00000561637 GPRASP2Q96D09 838 aa28.97■■■□□ 2.23
NME3-202ENST00000561637 RIC8AQ9NPQ8 531 aa28.97■■■□□ 2.23
NME3-202ENST00000561637 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.96■■■□□ 2.23
NME3-202ENST00000561637 TREHO43280 583 aa28.96■■■□□ 2.23
NME3-202ENST00000561637 HOXC8P31273 242 aa28.96■■■□□ 2.23
NME3-202ENST00000561637 ADCY7P51828 1080 aa28.96■■■□□ 2.23
NME3-202ENST00000561637 SENP7Q9BQF6 1050 aa28.96■■■□□ 2.23
NME3-202ENST00000561637 UBE2ZQ9H832 354 aaPredicted RBP28.96■■■□□ 2.23
NME3-202ENST00000561637 C17orf102A2RUQ5 167 aa28.95■■■□□ 2.22
NME3-202ENST00000561637 SERINC5Q86VE9 423 aa28.95■■■□□ 2.22
NME3-202ENST00000561637 OSBPL7Q9BZF2 842 aa28.95■■■□□ 2.22
NME3-202ENST00000561637 RNPEPQ9H4A4 650 aa28.95■■■□□ 2.22
NME3-202ENST00000561637 SETD4Q9NVD3 440 aa28.95■■■□□ 2.22
NME3-202ENST00000561637 BARHL2Q9NY43 387 aa28.95■■■□□ 2.22
NME3-202ENST00000561637 SMCO2A6NFE2 343 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 REC8O95072 547 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 GJB5O95377 273 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 ERVK-21P61565 698 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 MTMR1Q13613 665 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 PPP1R18Q6NYC8 613 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 CNKSR3Q6P9H4 555 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 ALYREFQ86V81 257 aaKnown RBP28.94■■■□□ 2.22
NME3-202ENST00000561637 FAM178BQ8IXR5 827 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 ATP6V0A1Q93050 837 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 ANO3Q9BYT9 981 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 JADE2Q9NQC1 790 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 PIEZO1Q92508 2521 aa28.94■■■□□ 2.22
NME3-202ENST00000561637 GSTTP1A0A1W2PQM5 241 aa28.93■■■□□ 2.22
NME3-202ENST00000561637 LINC01553A4QN01 128 aa28.93■■■□□ 2.22
NME3-202ENST00000561637 CXCL10P02778 98 aa28.93■■■□□ 2.22
NME3-202ENST00000561637 RCAN1P53805 252 aa28.93■■■□□ 2.22
NME3-202ENST00000561637 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.93■■■□□ 2.22
NME3-202ENST00000561637 PHKBQ93100 1093 aa28.93■■■□□ 2.22
NME3-202ENST00000561637 RAD9AQ99638 391 aa28.93■■■□□ 2.22
NME3-202ENST00000561637 USP26Q9BXU7 913 aa28.93■■■□□ 2.22
NME3-202ENST00000561637 AGXT2Q9BYV1 514 aa28.93■■■□□ 2.22
NME3-202ENST00000561637 NID2Q14112 1375 aa28.92■■■□□ 2.22
NME3-202ENST00000561637 TCF7P36402 384 aaPredicted RBP28.92■■■□□ 2.22
NME3-202ENST00000561637 THPOP40225 353 aa28.92■■■□□ 2.22
NME3-202ENST00000561637 PKN1Q16512 942 aa28.92■■■□□ 2.22
NME3-202ENST00000561637 TGS1Q96RS0 853 aaKnown RBP28.92■■■□□ 2.22
NME3-202ENST00000561637 LARP6Q9BRS8 491 aaKnown RBP28.92■■■□□ 2.22
NME3-202ENST00000561637 NCOA5Q9HCD5 579 aaKnown RBP28.92■■■□□ 2.22
NME3-202ENST00000561637 ARP10275 920 aa28.91■■■□□ 2.22
NME3-202ENST00000561637 IL9P15248 144 aa28.91■■■□□ 2.22
NME3-202ENST00000561637 KCNA5P22460 613 aa28.91■■■□□ 2.22
NME3-202ENST00000561637 PFKFB3Q16875 520 aaPredicted RBP28.91■■■□□ 2.22
NME3-202ENST00000561637 LEXMQ3ZCV2 418 aa28.91■■■□□ 2.22
NME3-202ENST00000561637 JAKMIP3Q5VZ66 844 aa28.91■■■□□ 2.22
NME3-202ENST00000561637 FAM117BQ6P1L5 589 aa28.91■■■□□ 2.22
NME3-202ENST00000561637 GJD3Q8N144 294 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms