RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 WTAPQ15007 396 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 TIGD5Q53EQ6 642 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 CATIPQ7Z7H3 387 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 FCHSD1Q86WN1 690 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 TRIM50Q86XT4 487 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 TEX2Q8IWB9 1127 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 FAM178BQ8IXR5 827 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 MYOCDQ8IZQ8 938 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.69□□□□□ -0.86
PALB2-202ENST00000561514 LMBR1Q8WVP7 490 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
PALB2-202ENST00000561514 GPRASP2Q96D09 838 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 EHMT1Q9H9B1 1298 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 LY9Q9HBG7 655 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 CD320Q9NPF0 282 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 TELO2Q9Y4R8 837 aa9.69□□□□□ -0.86
PALB2-202ENST00000561514 NRCAMQ92823 1304 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 ERICH2A1L162 156 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 MBLAC1A4D2B0 266 aaPredicted RBP9.68□□□□□ -0.86
PALB2-202ENST00000561514 C5orf67F2Z3F1 127 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 RBAK-RBAKDNI3L0D1 243 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 NOP56O00567 594 aaKnown RBP9.68□□□□□ -0.86
PALB2-202ENST00000561514 SORBS3O60504 671 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 KCNA2P16389 499 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 MGAT3Q09327 533 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 PUS10Q3MIT2 529 aaKnown RBP9.68□□□□□ -0.86
PALB2-202ENST00000561514 EPC2Q52LR7 807 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 TMEM31Q5JXX7 168 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 TAF2Q6P1X5 1199 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 CYFIP1Q7L576 1253 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 RALYLQ86SE5 291 aaKnown RBP9.68□□□□□ -0.86
PALB2-202ENST00000561514 GIMAP8Q8ND71 665 aaPredicted RBP9.68□□□□□ -0.86
PALB2-202ENST00000561514 ZFP91Q96JP5 570 aaPredicted RBP9.68□□□□□ -0.86
PALB2-202ENST00000561514 LZTS2Q9BRK4 669 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 SETD4Q9NVD3 440 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 ZNF215Q9UL58 517 aaPredicted RBP9.68□□□□□ -0.86
PALB2-202ENST00000561514 MTUS1Q9ULD2 1270 aa9.68□□□□□ -0.86
PALB2-202ENST00000561514 GRXCR2A6NFK2 248 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 CTSHP09668 335 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 KIF5BP33176 963 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 PTPROQ16827 1216 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 FAM117BQ6P1L5 589 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 USP17L6PQ6QN14 398 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 ZNF654Q8IZM8 581 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 CRIPAKQ8N1N5 446 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 CLP1Q92989 425 aaKnown RBP9.67□□□□□ -0.86
PALB2-202ENST00000561514 PABPC5Q96DU9 382 aaKnown RBP9.67□□□□□ -0.86
PALB2-202ENST00000561514 RRP36Q96EU6 259 aaKnown RBP9.67□□□□□ -0.86
PALB2-202ENST00000561514 CDHR1Q96JP9 859 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 YME1L1Q96TA2 773 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 IFIH1Q9BYX4 1025 aaKnown RBP9.67□□□□□ -0.86
PALB2-202ENST00000561514 UBIAD1Q9Y5Z9 338 aa9.67□□□□□ -0.86
PALB2-202ENST00000561514 TRIP12Q14669 1992 aaPredicted RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 SH2B2O14492 632 aaPredicted RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 CHRNA1P02708 482 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 RPLP2P05387 115 aaKnown RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 RB1P06400 928 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 ITGB5P18084 799 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 KCNA5P22460 613 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 LIFRP42702 1097 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 GNAQP50148 359 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 COL9A3Q14050 684 aaPredicted RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 LPIN1Q14693 890 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 CTC1Q2NKJ3 1217 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 MARCH8Q5T0T0 291 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 RUFY4Q6ZNE9 571 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 FAM43BQ6ZT52 329 aaPredicted RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 NLRX1Q86UT6 975 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 TMEM192Q8IY95 271 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 SRBD1Q8N5C6 995 aaKnown RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 BANK1Q8NDB2 785 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 CTCFLQ8NI51 663 aaPredicted RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 ZNF689Q96CS4 500 aaPredicted RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 FAM122AQ96E09 287 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 TMEM87BQ96K49 555 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 LMAN2LQ9H0V9 348 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 NSUN3Q9H649 340 aaKnown RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 RTEL1Q9NZ71 1219 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 RBM8AQ9Y5S9 174 aaKnown RBP9.66□□□□□ -0.86
PALB2-202ENST00000561514 SQORQ9Y6N5 450 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 SIP14410 1827 aa9.66□□□□□ -0.86
PALB2-202ENST00000561514 MICAL3Q7RTP6 2002 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 ADGRA3Q8IWK6 1321 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 GSTTP1A0A1W2PQM5 241 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 MAFGO15525 162 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 NCK2O43639 380 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 ATP9AO75110 1047 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 PLEKHA8P1O95397 391 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 IL9P15248 144 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 TCF7P36402 384 aaPredicted RBP9.65□□□□□ -0.86
PALB2-202ENST00000561514 ARHGAP4P98171 946 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 PPFIA1Q13136 1202 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 GPM6BQ13491 265 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 TCEAL5Q5H9L2 206 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 FBXO47Q5MNV8 452 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 PTCRAQ6ISU1 281 aaPredicted RBP9.65□□□□□ -0.86
PALB2-202ENST00000561514 TMTC3Q6ZXV5 915 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 SGMS1Q86VZ5 419 aa9.65□□□□□ -0.86
PALB2-202ENST00000561514 GJD3Q8N144 294 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms