RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PLEKHG4Q58EX7 1191 aa31.06■■■□□ 2.56
SNRPA1-215ENST00000561187 XRRA1Q6P2D8 792 aa31.06■■■□□ 2.56
SNRPA1-215ENST00000561187 PGBD1Q96JS3 809 aa31.06■■■□□ 2.56
SNRPA1-215ENST00000561187 TGS1Q96RS0 853 aaKnown RBP31.06■■■□□ 2.56
SNRPA1-215ENST00000561187 KCNA2P16389 499 aa31.05■■■□□ 2.56
SNRPA1-215ENST00000561187 SENP7Q9BQF6 1050 aa31.05■■■□□ 2.56
SNRPA1-215ENST00000561187 SIP14410 1827 aa31.05■■■□□ 2.56
SNRPA1-215ENST00000561187 CNTNAP5Q8WYK1 1306 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 UPP2O95045 317 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 GNAT1P11488 350 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 RUFY4Q6ZNE9 571 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 SEPT8Q92599 483 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 GPRASP2Q96D09 838 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 C17orf80Q9BSJ5 609 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 SUGCTQ9HAC7 445 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 PCDHA6Q9UN73 950 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 PCDHA8Q9Y5H6 950 aa31.04■■■□□ 2.56
SNRPA1-215ENST00000561187 MTMR1Q13613 665 aa31.03■■■□□ 2.56
SNRPA1-215ENST00000561187 BMP2KLQ5H9B9 411 aa31.03■■■□□ 2.56
SNRPA1-215ENST00000561187 WWC2Q6AWC2 1192 aa31.03■■■□□ 2.56
SNRPA1-215ENST00000561187 SYNE3Q6ZMZ3 975 aa31.03■■■□□ 2.56
SNRPA1-215ENST00000561187 KAT6AQ92794 2004 aa31.03■■■□□ 2.56
SNRPA1-215ENST00000561187 BRWD1Q9NSI6 2320 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 BMP1P13497 986 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 ERVK-21P61565 698 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 PPFIA1Q13136 1202 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 MKRN4PQ13434 485 aaPredicted RBP31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 RNF20Q5VTR2 975 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 APOA5Q6Q788 366 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 SGMS1Q86VZ5 419 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 NEK1Q96PY6 1258 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 UBIAD1Q9Y5Z9 338 aa31.02■■■□□ 2.56
SNRPA1-215ENST00000561187 NAPAP54920 295 aa31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 AAK1Q2M2I8 961 aa31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 TYW1BQ6NUM6 668 aa31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 GIMAP8Q8ND71 665 aaPredicted RBP31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 GLG1Q92896 1179 aa31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 ZBTB10Q96DT7 871 aa31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 BRPF3Q9ULD4 1205 aa31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 NAP1L2Q9ULW6 460 aaPredicted RBP31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 INSL6Q9Y581 213 aa31.01■■■□□ 2.55
SNRPA1-215ENST00000561187 GSTTP1A0A1W2PQM5 241 aa31■■■□□ 2.55
SNRPA1-215ENST00000561187 IGBP1P78318 339 aa31■■■□□ 2.55
SNRPA1-215ENST00000561187 ADAM17P78536 824 aa31■■■□□ 2.55
SNRPA1-215ENST00000561187 ADCK5Q3MIX3 580 aa31■■■□□ 2.55
SNRPA1-215ENST00000561187 RASEFQ8IZ41 740 aa31■■■□□ 2.55
SNRPA1-215ENST00000561187 CDHR1Q96JP9 859 aa31■■■□□ 2.55
SNRPA1-215ENST00000561187 YME1L1Q96TA2 773 aa31■■■□□ 2.55
SNRPA1-215ENST00000561187 CAND2O75155 1236 aa30.99■■■□□ 2.55
SNRPA1-215ENST00000561187 GHRP10912 638 aa30.99■■■□□ 2.55
SNRPA1-215ENST00000561187 RTN1Q16799 776 aa30.99■■■□□ 2.55
SNRPA1-215ENST00000561187 FBXO22Q8NEZ5 403 aa30.99■■■□□ 2.55
SNRPA1-215ENST00000561187 SEPT1Q8WYJ6 367 aa30.99■■■□□ 2.55
SNRPA1-215ENST00000561187 HLA-CQ95604 372 aa30.99■■■□□ 2.55
SNRPA1-215ENST00000561187 IFIH1Q9BYX4 1025 aaKnown RBP30.99■■■□□ 2.55
SNRPA1-215ENST00000561187 BDP1A6H8Y1 2624 aa30.99■■■□□ 2.55
SNRPA1-215ENST00000561187 NRCAMQ92823 1304 aa30.98■■■□□ 2.55
SNRPA1-215ENST00000561187 LOC101059915A0A1B0GWI6 518 aaPredicted RBP30.98■■■□□ 2.55
SNRPA1-215ENST00000561187 GRIK4Q16099 956 aa30.98■■■□□ 2.55
SNRPA1-215ENST00000561187 JADE2Q9NQC1 790 aa30.98■■■□□ 2.55
SNRPA1-215ENST00000561187 GOLGA8AA7E2F4 631 aa30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 GOLGA8BA8MQT2 603 aa30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 ZBTB43O43298 467 aa30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 CHRNA1P02708 482 aa30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 CENPQQ7L2Z9 268 aaPredicted RBP30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 CYP2W1Q8TAV3 490 aa30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 EHMT1Q9H9B1 1298 aa30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 RBM28Q9NW13 759 aaKnown RBP30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 TUBE1Q9UJT0 475 aa30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 COG5Q9UP83 839 aa30.97■■■□□ 2.55
SNRPA1-215ENST00000561187 KLF18A0A0U1RQI7 1052 aa30.96■■■□□ 2.55
SNRPA1-215ENST00000561187 HTRA4P83105 476 aaPredicted RBP30.96■■■□□ 2.55
SNRPA1-215ENST00000561187 JPH1Q9HDC5 661 aaPredicted RBP30.96■■■□□ 2.55
SNRPA1-215ENST00000561187 TMEM260Q9NX78 707 aa30.96■■■□□ 2.55
SNRPA1-215ENST00000561187 ERAP1Q9NZ08 941 aa30.96■■■□□ 2.55
SNRPA1-215ENST00000561187 CPA1P15085 419 aa30.95■■■□□ 2.55
SNRPA1-215ENST00000561187 EXOSC10Q01780 885 aaKnown RBP30.95■■■□□ 2.55
SNRPA1-215ENST00000561187 DHX32Q7L7V1 743 aaKnown RBP30.95■■■□□ 2.55
SNRPA1-215ENST00000561187 DNAJB3Q8WWF6 145 aa30.95■■■□□ 2.55
SNRPA1-215ENST00000561187 FAM49AQ9H0Q0 323 aaPredicted RBP30.95■■■□□ 2.55
SNRPA1-215ENST00000561187 V9GY48 417 aaPredicted RBP30.95■■■□□ 2.55
SNRPA1-215ENST00000561187 CDC45O75419 566 aa30.94■■■□□ 2.54
SNRPA1-215ENST00000561187 ADCY7P51828 1080 aa30.94■■■□□ 2.54
SNRPA1-215ENST00000561187 FAM26DQ5JW98 314 aa30.94■■■□□ 2.54
SNRPA1-215ENST00000561187 SP7Q8TDD2 431 aaPredicted RBP30.94■■■□□ 2.54
SNRPA1-215ENST00000561187 TOP1MTQ969P6 601 aa30.94■■■□□ 2.54
SNRPA1-215ENST00000561187 PCYT2Q99447 389 aa30.94■■■□□ 2.54
SNRPA1-215ENST00000561187 ANO3Q9BYT9 981 aa30.94■■■□□ 2.54
SNRPA1-215ENST00000561187 KCNH7Q9NS40 1196 aa30.94■■■□□ 2.54
SNRPA1-215ENST00000561187 STXBP3O00186 592 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 FUT2Q10981 343 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 TAF2Q6P1X5 1199 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 MXRA8Q9BRK3 442 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 SMARCAD1Q9H4L7 1026 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 RIC8AQ9NPQ8 531 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 SLC9A2Q9UBY0 812 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 RAPGEFL1Q9UHV5 662 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 TRPC6Q9Y210 931 aa30.93■■■□□ 2.54
SNRPA1-215ENST00000561187 ARP10275 920 aa30.92■■■□□ 2.54
SNRPA1-215ENST00000561187 CDC27P30260 824 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms