RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 NDUFS2O75306 463 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 H2AFYO75367 372 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 VAMP4O75379 141 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 TUSC2O75896 110 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 RGS9O75916 674 aaPredicted RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 GFPT2O94808 682 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 UBXN7O94888 489 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 UBOX5O94941 541 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 CNOT4O95628 575 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 APOA4P06727 396 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 CD3EP07766 207 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 HNRNPCP07910 306 aaKnown RBP eCLIP2.36□□□□□ -2.03
RTF1-207ENST00000561076 SLC3A2P08195 630 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 POU2F2P09086 479 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 PARP1P09874 1014 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 DHRS4L1P0CG22 281 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 PDCP20941 246 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ALAS2P22557 587 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 HTR1BP28222 390 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ATP6V1E1P36543 226 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 LTBRP36941 435 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ETV3P41162 512 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 IL12RB1P42701 662 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ECE1P42892 770 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 TM4SF4P48230 202 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 PRIM2P49643 509 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ARL4CP56559 192 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 BCAR1P56945 870 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ERVK-24P63145 666 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 TNP2Q05952 138 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SEPT2Q15019 361 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 POLD3Q15054 466 aaPredicted RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 CNN3Q15417 329 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 SF1Q15637 639 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 NTRK3Q16288 839 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 UGT8Q16880 541 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 KIF4BQ2VIQ3 1234 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 INAVAQ3KP66 663 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ANO6Q4KMQ2 910 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 TOR2AQ5JU69 321 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ATAT1Q5SQI0 421 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 THEMIS2Q5TEJ8 643 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 LRCH2Q5VUJ6 765 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SPATA1Q5VX52 437 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ARMC3Q5W041 872 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 IQCEQ6IPM2 695 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 PDXDC1Q6P996 788 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 B3GNT9Q6UX72 402 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 CYP26C1Q6V0L0 522 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 LIAT1Q6ZQX7 453 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 USP45Q70EL2 814 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 FASTKD5Q7L8L6 764 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 LCA5Q86VQ0 697 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SNX32Q86XE0 403 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 MRPL41Q8IXM3 137 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 TXLNBQ8N3L3 684 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 FAM26EQ8N5C1 309 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 IL22RA1Q8N6P7 574 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 C7orf31Q8N865 590 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ZNF513Q8N8E2 541 aaPredicted RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 KIAA1958Q8N8K9 716 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ARL10Q8N8L6 244 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 PPP1R35Q8TAP8 253 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 DCAF11Q8TEB1 546 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 AFAP1L1Q8TED9 768 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 JADE3Q92613 823 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 WNT8BQ93098 351 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 MUL1Q969V5 352 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ZNF566Q969W8 418 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 KIAA1191Q96A73 305 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 VMP1Q96GC9 406 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 GMCL1Q96IK5 515 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 KCNJ15Q99712 375 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SLC30A3Q99726 388 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 BARD1Q99728 777 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 B3GNT5Q9BYG0 378 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 GTPBP4Q9BZE4 634 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 ZDHHC5Q9C0B5 715 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ATXN3LQ9H3M9 355 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ZNF287Q9HBT7 754 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SH3GLB2Q9NR46 395 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ZNF277Q9NRM2 450 aaPredicted RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 TOPORSQ9NS56 1045 aaPredicted RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 GPR27Q9NS67 375 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 LRRC4BQ9NT99 713 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 OLA1Q9NTK5 396 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 BLOC1S4Q9NUP1 217 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 GPATCH2Q9NW75 528 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SAGE1Q9NXZ1 904 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 FNIP2Q9P278 1114 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 IFT80Q9P2H3 777 aaPredicted RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 CCDC39Q9UFE4 941 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 FBXO10Q9UK96 956 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 SLC13A4Q9UKG4 626 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 KCNH3Q9ULD8 1083 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 AP4E1Q9UPM8 1137 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 POLHQ9Y253 713 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 RRP7AQ9Y3A4 280 aaKnown RBP2.36□□□□□ -2.03
RTF1-207ENST00000561076 NUB1Q9Y5A7 615 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGB2Q9Y5G2 931 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms