RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 FRMD3A2A2Y4 597 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 B4DLN1 442 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 CHMP2AO43633 222 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 P4HBP07237 508 aaKnown RBP19.07■□□□□ 0.64
HDDC3-206ENST00000561036 CCNE1P24864 410 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 SFNP31947 248 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 JAK3P52333 1124 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 STX17P56962 302 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 CYP4A11Q02928 519 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 STK4Q13043 487 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 GNPTABQ3T906 1256 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 TPH2Q8IWU9 490 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 GUF1Q8N442 669 aaKnown RBP19.07■□□□□ 0.64
HDDC3-206ENST00000561036 SPC24Q8NBT2 197 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 SHCBP1Q8NEM2 672 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 PURBQ96QR8 312 aaKnown RBP19.07■□□□□ 0.64
HDDC3-206ENST00000561036 CTAGE1Q96RT6 745 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 SENP7Q9BQF6 1050 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 PAGR1Q9BTK6 254 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 MROH8Q9H579 483 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 KCND2Q9NZV8 630 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 RBPJLQ9UBG7 517 aa19.07■□□□□ 0.64
HDDC3-206ENST00000561036 ADD3Q9UEY8 706 aaKnown RBP19.07■□□□□ 0.64
HDDC3-206ENST00000561036 NFASCO94856 1347 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 TESPA1A2RU30 521 aaPredicted RBP19.06■□□□□ 0.64
HDDC3-206ENST00000561036 ESPNB1AK53 854 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 CELF2O95319 508 aaKnown RBP19.06■□□□□ 0.64
HDDC3-206ENST00000561036 LYPLA2O95372 231 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 KRT18P05783 430 aaKnown RBP19.06■□□□□ 0.64
HDDC3-206ENST00000561036 ZBTB48P10074 688 aaPredicted RBP19.06■□□□□ 0.64
HDDC3-206ENST00000561036 IDEP14735 1019 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 PSMC6P62333 389 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 COASYQ13057 564 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 STXBP2Q15833 593 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 ARSHQ5FYA8 562 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 ZNF746Q6NUN9 644 aaPredicted RBP19.06■□□□□ 0.64
HDDC3-206ENST00000561036 NCAPG2Q86XI2 1143 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 P2RX5Q93086 422 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 MS4A4AQ96JQ5 239 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 ZSWIM4Q9H7M6 989 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 SAMSN1Q9NSI8 373 aaKnown RBP19.06■□□□□ 0.64
HDDC3-206ENST00000561036 ZKSCAN5Q9Y2L8 839 aa19.06■□□□□ 0.64
HDDC3-206ENST00000561036 SPATA31C2B4DYI2 1134 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 POTEB2H3BUK9 544 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 EIF3JO75822 258 aaKnown RBP19.05■□□□□ 0.64
HDDC3-206ENST00000561036 KIF20AO95235 890 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 FCER1AP12319 257 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 ERCC3P19447 782 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 ICAM3P32942 547 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 CTTNQ14247 550 aaKnown RBP19.05■□□□□ 0.64
HDDC3-206ENST00000561036 FAM26FQ5R3K3 315 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 TTI2Q6NXR4 508 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 ANKRD23Q86SG2 305 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 KIAA0895Q8NCT3 520 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 ANKRD20A12PQ8NF67 263 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 MPHOSPH6Q99547 160 aaKnown RBP19.05■□□□□ 0.64
HDDC3-206ENST00000561036 BHMT2Q9H2M3 363 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 THAP9Q9H5L6 903 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 MAPK8IP1Q9UQF2 711 aa19.05■□□□□ 0.64
HDDC3-206ENST00000561036 LOC102724159A0A0B4J2E5 919 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 LRRC10BA6NIK2 292 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 WDR64B1ANS9 1081 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 EDNRBP24530 442 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 ALDH5A1P51649 535 aaPredicted RBP19.04■□□□□ 0.64
HDDC3-206ENST00000561036 GSDMDP57764 484 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 GIT2Q14161 759 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 PWP2Q15269 919 aaKnown RBP19.04■□□□□ 0.64
HDDC3-206ENST00000561036 CENPPQ6IPU0 288 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 FAM133AQ8N9E0 248 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 LXNQ9BS40 222 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 LIMA1Q9UHB6 759 aaKnown RBP19.04■□□□□ 0.64
HDDC3-206ENST00000561036 LOXHD1Q8IVV2 1947 aa19.04■□□□□ 0.64
HDDC3-206ENST00000561036 CCL15-CCL14A0A0B4J2E2 113 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 GAP43P17677 238 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 QARSP47897 775 aaKnown RBP19.03■□□□□ 0.64
HDDC3-206ENST00000561036 GCLCP48506 637 aaPredicted RBP19.03■□□□□ 0.64
HDDC3-206ENST00000561036 CCL15Q16663 113 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 FILIP1LQ4L180 1135 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 SPRYD7Q5W111 196 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 CHADLQ6NUI6 762 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 CCDC186Q7Z3E2 898 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 SMAP1Q8IYB5 467 aaPredicted RBP19.03■□□□□ 0.64
HDDC3-206ENST00000561036 TXNRD2Q9NNW7 524 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 SLC39A2Q9NP94 309 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 PKD2L1Q9P0L9 805 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 DBR1Q9UK59 544 aaKnown RBP19.03■□□□□ 0.64
HDDC3-206ENST00000561036 LCTP09848 1927 aa19.03■□□□□ 0.64
HDDC3-206ENST00000561036 A0A1B0GTH6 734 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 DDX39AO00148 427 aaKnown RBP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 DKC1O60832 514 aaKnown RBP eCLIP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 ATP9AO75110 1047 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 RGS20O76081 388 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 FGFR1OPO95684 399 aaKnown RBP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 ITGBL1O95965 494 aaPredicted RBP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 KCNA2P16389 499 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 EEF1GP26641 437 aaKnown RBP19.02■□□□□ 0.64
HDDC3-206ENST00000561036 ERVK-9P63128 1117 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 ERVK-24P63145 666 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 CCNA1P78396 465 aa19.02■□□□□ 0.64
HDDC3-206ENST00000561036 CNTN2Q02246 1040 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms