RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 METTL23Q86XA0 190 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 INO80BQ9C086 356 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 SAMSN1Q9NSI8 373 aaKnown RBP14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 MIF4GDA9UHW6 222 aaKnown RBP14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 TOM1L1O75674 476 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 CHEK2O96017 543 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 SPOPLQ6IQ16 392 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 KSR1Q8IVT5 923 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 SMYD4Q8IYR2 804 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 GIPC2Q8TF65 315 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 VPS39Q96JC1 886 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 CALN1Q9BXU9 219 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 NOP53Q9NZM5 478 aaKnown RBP14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 XDHP47989 1333 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 KCNQ3O43525 872 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 CCNA1P78396 465 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 NR1H3Q13133 447 aa14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 ST13P4Q8IZP2 240 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 UBE2TQ9NPD8 197 aaPredicted RBP14.24□□□□□ -0.13
CSPG4P11-201ENST00000560634 LMTK3Q96Q04 1460 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 SOWAHDA6NJG2 315 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 PRPSAP2O60256 369 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 ADD2P35612 726 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 BBS9Q3SYG4 887 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 NCAPG2Q86XI2 1143 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 PYROXD1Q8WU10 500 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 LRRC4Q9HBW1 653 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 CXCR5P32302 372 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 SLCO1A2P46721 670 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 USP14P54578 494 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 MIS18BP1Q6P0N0 1132 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 WDR75Q8IWA0 830 aaKnown RBP14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 KCTD6Q8NC69 237 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 CEP170P1Q96L14 293 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 TTC25Q96NG3 672 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 BEGAINQ9BUH8 593 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 GREM2Q9H772 168 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 KRT82Q9NSB4 513 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 MYOM2P54296 1465 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 TCP10L2B9ZVM9 353 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 TRPA1O75762 1119 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 SCNN1DP51172 638 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 FAM98CQ17RN3 349 aaKnown RBP14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 DHX38Q92620 1227 aaKnown RBP14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 CHMP6Q96FZ7 201 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 MXD3Q9BW11 206 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 ABCB6Q9NP58 842 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 SH2B2O14492 632 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 PYGBP11216 843 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 EEF1B2P24534 225 aaKnown RBP14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 CDR2Q01850 454 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 ADCY1Q08828 1119 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 SARM1Q6SZW1 724 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 LCMT1Q9UIC8 334 aa14.23□□□□□ -0.13
CSPG4P11-201ENST00000560634 FRMD3A2A2Y4 597 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 NVLO15381 856 aaKnown RBP14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 PNMA6AP0CW24 399 aaPredicted RBP14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 SPARCL1Q14515 664 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 NUGGCQ68CJ6 796 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 KLC3Q6P597 504 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 SYT2Q8N9I0 419 aaPredicted RBP14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 CENPKQ9BS16 269 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 TRIM15Q9C019 465 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 TBK1Q9UHD2 729 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 ANO9A1A5B4 782 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 CLIC2O15247 247 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 GOLGA8FQ08AF8 430 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 GOLGA8DPQ0D2H9 430 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 MYO1EQ12965 1108 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 RESTQ13127 1097 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 TSTA3Q13630 321 aaPredicted RBP14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 CRLF3Q8IUI8 442 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 TRAIPQ9BWF2 469 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 DONSONQ9NYP3 566 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 PZPP20742 1482 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 MFAP3LO75121 409 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 ZBED1O96006 694 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 IL6STP40189 918 aaPredicted RBP14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 KRT39Q6A163 491 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 ARMCX2Q7L311 632 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 TRIML2Q8N7C3 387 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 RASGRP4Q8TDF6 673 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 PAGE5Q96GU1 130 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 TRIM55Q9BYV6 548 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 PITPNM3Q9BZ71 974 aa14.22□□□□□ -0.13
CSPG4P11-201ENST00000560634 CFAP43Q8NDM7 1665 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 PLA2G4BP0C869 781 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 EEF1DP29692 281 aaKnown RBP14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 PPARGP37231 505 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 TFAMQ00059 246 aaKnown RBP14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 MB21D1Q8N884 522 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 FBXL13Q8NEE6 735 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 KIFC3Q9BVG8 833 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 DHX36Q9H2U1 1008 aaKnown RBP14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 RPAP1Q9BWH6 1393 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 PLXNC1O60486 1568 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 CHUKO15111 745 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 BMP3P12645 472 aa14.21□□□□□ -0.13
CSPG4P11-201ENST00000560634 ADORA1P30542 326 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms