RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PSMD14O00487 310 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 PES1O00541 588 aaKnown RBP10.75□□□□□ -0.69
RTF1-206ENST00000560447 FANCGO15287 622 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 GDF11O95390 407 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 GAP43P17677 238 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 CYP11B2P19099 503 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 ARHGAP25P42331 645 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 SLC12A3P55017 1021 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 SETQ01105 290 aaPredicted RBP10.75□□□□□ -0.69
RTF1-206ENST00000560447 GHRHRQ02643 423 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 IKQ13123 557 aaPredicted RBP10.75□□□□□ -0.69
RTF1-206ENST00000560447 NFIL3Q16649 462 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 BMT2Q1RMZ1 405 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 ERCC6LQ2NKX8 1250 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 ZNF569Q5MCW4 686 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 FBXO38Q6PIJ6 1188 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 WDR59Q6PJI9 974 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 DYMQ7RTS9 669 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 KCNK18Q7Z418 384 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 GPBP1Q86WP2 473 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 NEK9Q8TD19 979 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 LENG9Q96B70 501 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 ZBED3Q96IU2 234 aaPredicted RBP10.75□□□□□ -0.69
RTF1-206ENST00000560447 NUDT12Q9BQG2 462 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 VCPKMTQ9H867 229 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 LZTFL1Q9NQ48 299 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 KCND2Q9NZV8 630 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 FEM1BQ9UK73 627 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 ZBTB21Q9ULJ3 1066 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 ZNRF3Q9ULT6 936 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 KIAA1024Q9UPX6 916 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 DNM3Q9UQ16 869 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 DAAM1Q9Y4D1 1078 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 PCDHA2Q9Y5H9 948 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 UBE4BO95155 1302 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 CNTNAP1P78357 1384 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 EP400Q96L91 3159 aa10.75□□□□□ -0.69
RTF1-206ENST00000560447 SSU72P8A0A1W2PR75 194 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 GCOM1H8Y6P7 765 aaPredicted RBP10.74□□□□□ -0.69
RTF1-206ENST00000560447 RNF225M0QZC1 329 aaPredicted RBP10.74□□□□□ -0.69
RTF1-206ENST00000560447 C21orf2O43822 256 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 COBLO75128 1261 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 EYA4O95677 639 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 POLR2MP0CAP2 368 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.69
RTF1-206ENST00000560447 BRD3Q15059 726 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 ECM1Q16610 540 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 TMCO3Q6UWJ1 677 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 NIPA1Q7RTP0 329 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 KRT26Q7Z3Y9 468 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 LARGE2Q8N3Y3 721 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 MSL3Q8N5Y2 521 aaKnown RBP10.74□□□□□ -0.69
RTF1-206ENST00000560447 ACRBPQ8NEB7 543 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 PCMTD1Q96MG8 357 aaPredicted RBP10.74□□□□□ -0.69
RTF1-206ENST00000560447 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
RTF1-206ENST00000560447 SLF1Q9BQI6 1058 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 WDR11Q9BZH6 1224 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 MAF1Q9H063 256 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 LUC7LQ9NQ29 371 aaKnown RBP10.74□□□□□ -0.69
RTF1-206ENST00000560447 VAV3Q9UKW4 847 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 MYO6Q9UM54 1294 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 TRAF3IP3Q9Y228 551 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 PCDHAC2Q9Y5I4 1007 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 ATP8B3O60423 1300 aa10.74□□□□□ -0.69
RTF1-206ENST00000560447 A0A1W2PRG0 241 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 CCDC151A5D8V7 595 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 RASSF10A6NK89 507 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 FAM196BA6NMK8 535 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 POTECB2RU33 542 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 PDXKO00764 312 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 CETN3O15182 167 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 EIF3DO15371 548 aaKnown RBP eCLIP10.73□□□□□ -0.69
RTF1-206ENST00000560447 CALUO43852 315 aaPredicted RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 RAD21O60216 631 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 USO1O60763 962 aaKnown RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 MED24O75448 989 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 KRT18P05783 430 aaKnown RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 ASNSP08243 561 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 FDX1P10109 184 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 BCRP11274 1271 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 ANXA13P27216 316 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 CAP2P40123 477 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 BAG6P46379 1132 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 VAV2P52735 878 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 TGFB2P61812 414 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 GABPB1Q06547 395 aaPredicted RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 CKAP4Q07065 602 aaKnown RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 PPP2R5CQ13362 524 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 NAA30Q147X3 362 aaPredicted RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 SPA17Q15506 151 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 EZH2Q15910 746 aaKnown RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 PRR16Q569H4 304 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 HERC4Q5GLZ8 1057 aaPredicted RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 EPM2AIP1Q7L775 607 aaPredicted RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 FRMD5Q7Z6J6 570 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 TRIM59Q8IWR1 403 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 NIM1KQ8IY84 436 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 KRT222Q8N1A0 295 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 SLC35F6Q8N357 371 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms