RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 MFSD1Q9H3U5 465 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 TUT1Q9H6E5 874 aaKnown RBP10.79□□□□□ -0.68
SMAD3-215ENST00000560424 TLE6Q9H808 572 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 MYH7BA7E2Y1 1941 aa10.79□□□□□ -0.68
SMAD3-215ENST00000560424 CDC45O75419 566 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 PDGFBP01127 241 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-215ENST00000560424 NR3C2P08235 984 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 HSPD1P10809 573 aaKnown RBP10.78□□□□□ -0.68
SMAD3-215ENST00000560424 SDSP20132 328 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 ZNF543Q08ER8 600 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 MTMR3Q13615 1198 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 CDC37Q16543 378 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-215ENST00000560424 CELF3Q5SZQ8 465 aaKnown RBP10.78□□□□□ -0.68
SMAD3-215ENST00000560424 GPATCH4Q5T3I0 446 aaKnown RBP10.78□□□□□ -0.68
SMAD3-215ENST00000560424 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 DGLUCYQ7Z3D6 616 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 FRMD5Q7Z6J6 570 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 RSPH3Q86UC2 560 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 POF1BQ8WVV4 589 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 SEC62Q99442 399 aaKnown RBP10.78□□□□□ -0.68
SMAD3-215ENST00000560424 RNPEPQ9H4A4 650 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 ZNF215Q9UL58 517 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-215ENST00000560424 MRPL11Q9Y3B7 192 aaKnown RBP10.78□□□□□ -0.68
SMAD3-215ENST00000560424 NR2E1Q9Y466 385 aa10.78□□□□□ -0.68
SMAD3-215ENST00000560424 ORC4O43929 436 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 PPFIA3O75145 1194 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 CFBP00751 764 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 ITGB1P05556 798 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 GHRP10912 638 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 HOXD8P13378 290 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-215ENST00000560424 SP100P23497 879 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-215ENST00000560424 NOVP48745 357 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 ARHGAP4P98171 946 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 SPOUT1Q5T280 376 aaKnown RBP10.77□□□□□ -0.69
SMAD3-215ENST00000560424 UBALD2Q8IYN6 164 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 KREMEN2Q8NCW0 462 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 KCNG4Q8TDN1 519 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 C16orf70Q9BSU1 422 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 PXMP2Q9NR77 195 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 FAM186AA6NE01 2351 aa10.77□□□□□ -0.69
SMAD3-215ENST00000560424 EPB41L2O43491 1005 aaKnown RBP10.76□□□□□ -0.69
SMAD3-215ENST00000560424 DGKIO75912 1065 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 GLP2RO95838 553 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 LGALS2P05162 132 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 LINC00271P0C7V0 271 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 GOLGA8HP0CJ92 632 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 STAG3L1P0CL83 205 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 DNAJB1P25685 340 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 CAMK1Q14012 370 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 PAN2Q504Q3 1202 aaKnown RBP10.76□□□□□ -0.69
SMAD3-215ENST00000560424 TSHZ3Q63HK5 1081 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 CMTR2Q8IYT2 770 aaKnown RBP10.76□□□□□ -0.69
SMAD3-215ENST00000560424 SPPL3Q8TCT6 385 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 TBC1D5Q92609 795 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 ZNF689Q96CS4 500 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-215ENST00000560424 USP26Q9BXU7 913 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 UBA5Q9GZZ9 404 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 SETD4Q9NVD3 440 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 COL20A1Q9P218 1284 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 LRFN2Q9ULH4 789 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 SORCS3Q9UPU3 1222 aa10.76□□□□□ -0.69
SMAD3-215ENST00000560424 MRPL42Q9Y6G3 142 aaKnown RBP10.76□□□□□ -0.69
SMAD3-215ENST00000560424 RIF1Q5UIP0 2472 aaKnown RBP10.76□□□□□ -0.69
SMAD3-215ENST00000560424 ENPP3O14638 875 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 PER2O15055 1255 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 TGFB3P10600 412 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 UBA1P22314 1058 aaKnown RBP10.75□□□□□ -0.69
SMAD3-215ENST00000560424 FAM26DQ5JW98 314 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-215ENST00000560424 CASC1Q6TDU7 716 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 TMEM105Q8N8V8 129 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 TTC14Q96N46 770 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 CDCA3Q99618 268 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-215ENST00000560424 HINFPQ9BQA5 517 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 OSBPL7Q9BZF2 842 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 UPF2Q9HAU5 1272 aaKnown RBP10.75□□□□□ -0.69
SMAD3-215ENST00000560424 RC3H2Q9HBD1 1191 aaKnown RBP10.75□□□□□ -0.69
SMAD3-215ENST00000560424 AAASQ9NRG9 546 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 TCP11L1Q9NUJ3 509 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 ANAPC4Q9UJX5 808 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 PCDHB12Q9Y5F1 795 aa10.75□□□□□ -0.69
SMAD3-215ENST00000560424 DMDP11532 3685 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 IBSPP21815 317 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-215ENST00000560424 CCND2P30279 289 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 HOXC8P31273 242 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 TECP42680 631 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 UBE3AQ05086 875 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 GNPTABQ3T906 1256 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 ZMYM1Q5SVZ6 1142 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 UTP14CQ5TAP6 766 aaKnown RBP10.74□□□□□ -0.69
SMAD3-215ENST00000560424 TAF2Q6P1X5 1199 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 NPAS4Q8IUM7 802 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 SUSD6Q92537 303 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 PDCD2LQ9BRP1 358 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 APOL5Q9BWW9 433 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 CPVLQ9H3G5 476 aa10.74□□□□□ -0.69
SMAD3-215ENST00000560424 MED19A0JLT2 244 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-215ENST00000560424 M0QZ92 97 aa10.73□□□□□ -0.69
SMAD3-215ENST00000560424 CHRNA1P02708 482 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms