RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 PPP1R11O60927 126 aaPredicted RBP13.4□□□□□ -0.26
IRF9-209ENST00000560365 MMP1P03956 469 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 RPLP2P05387 115 aaKnown RBP13.4□□□□□ -0.26
IRF9-209ENST00000560365 ICAM3P32942 547 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 LTBRP36941 435 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 NLRX1Q86UT6 975 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 LMBR1Q8WVP7 490 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 EDAQ92838 391 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 MTMR8Q96EF0 704 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 INPP4AQ96PE3 977 aaPredicted RBP13.4□□□□□ -0.26
IRF9-209ENST00000560365 PIGSQ96S52 555 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 MAD2L2Q9UI95 211 aa13.4□□□□□ -0.26
IRF9-209ENST00000560365 SPATA31C2B4DYI2 1134 aa13.39□□□□□ -0.27
IRF9-209ENST00000560365 M0QZ92 97 aa13.39□□□□□ -0.27
IRF9-209ENST00000560365 DLX2Q07687 328 aaPredicted RBP13.39□□□□□ -0.27
IRF9-209ENST00000560365 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
IRF9-209ENST00000560365 SART3Q15020 963 aaKnown RBP13.39□□□□□ -0.27
IRF9-209ENST00000560365 NAALADL2Q58DX5 795 aa13.39□□□□□ -0.27
IRF9-209ENST00000560365 TRIM50Q86XT4 487 aa13.39□□□□□ -0.27
IRF9-209ENST00000560365 SMARCC2Q8TAQ2 1214 aa13.39□□□□□ -0.27
IRF9-209ENST00000560365 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
IRF9-209ENST00000560365 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
IRF9-209ENST00000560365 ALG13Q9NP73 1137 aaKnown RBP13.39□□□□□ -0.27
IRF9-209ENST00000560365 MUC6Q6W4X9 2439 aa13.39□□□□□ -0.27
IRF9-209ENST00000560365 PNMA6FA0A0J9YX94 578 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 PALM3A6NDB9 673 aaPredicted RBP13.38□□□□□ -0.27
IRF9-209ENST00000560365 ENPP3O14638 875 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 TBX10O75333 385 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 CHRNA1P02708 482 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 STAG3L1P0CL83 205 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 PPFIA1Q13136 1202 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 XRRA1Q6P2D8 792 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 TRIM67Q6ZTA4 783 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 BMP8AQ7Z5Y6 402 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 GLG1Q92896 1179 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 TNPO1Q92973 898 aaKnown RBP13.38□□□□□ -0.27
IRF9-209ENST00000560365 P2RX5Q93086 422 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 CDHR1Q96JP9 859 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 SENP7Q9BQF6 1050 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 FTHL17Q9BXU8 183 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 RIOX1Q9H6W3 641 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 ERAP1Q9NZ08 941 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
IRF9-209ENST00000560365 KIAA1217Q5T5P2 1943 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 PIEZO1Q92508 2521 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 TMEM221A6NGB7 291 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 M0R296 226 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 TCF7P36402 384 aaPredicted RBP13.37□□□□□ -0.27
IRF9-209ENST00000560365 ADAM17P78536 824 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 MRPS9P82933 396 aaKnown RBP13.37□□□□□ -0.27
IRF9-209ENST00000560365 ADAM15Q13444 863 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 LPIN1Q14693 890 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 GRM4Q14833 912 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 IER5Q5VY09 327 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 TSHZ1Q6ZSZ6 1077 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
IRF9-209ENST00000560365 CMTR2Q8IYT2 770 aaKnown RBP13.37□□□□□ -0.27
IRF9-209ENST00000560365 IRF2BPLQ9H1B7 796 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 BCAS3Q9H6U6 928 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 EHMT1Q9H9B1 1298 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 PLAGL2Q9UPG8 496 aa13.37□□□□□ -0.27
IRF9-209ENST00000560365 FSD2A1L4K1 749 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 IFIT3O14879 490 aaKnown RBP13.36□□□□□ -0.27
IRF9-209ENST00000560365 LINC01565O15544 149 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 ST18O60284 1047 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 DGKIO75912 1065 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 MARK3P27448 753 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 GTF2F1P35269 517 aaKnown RBP eCLIP13.36□□□□□ -0.27
IRF9-209ENST00000560365 SEC23AQ15436 765 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 GRIK4Q16099 956 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 PCNX4Q63HM2 1172 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 CATIPQ7Z7H3 387 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 NPAS4Q8IUM7 802 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 MICAL1Q8TDZ2 1067 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 DNAJB3Q8WWF6 145 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 SEPT1Q8WYJ6 367 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 ZNF689Q96CS4 500 aaPredicted RBP13.36□□□□□ -0.27
IRF9-209ENST00000560365 SNX27Q96L92 541 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
IRF9-209ENST00000560365 SEC63Q9UGP8 760 aaKnown RBP13.36□□□□□ -0.27
IRF9-209ENST00000560365 LRFN2Q9ULH4 789 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 CDY2AQ9Y6F7 541 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
IRF9-209ENST00000560365 EYA4O95677 639 aa13.35□□□□□ -0.27
IRF9-209ENST00000560365 SRGAP2BP0DMP2 458 aa13.35□□□□□ -0.27
IRF9-209ENST00000560365 NRIP1P48552 1158 aa13.35□□□□□ -0.27
IRF9-209ENST00000560365 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
IRF9-209ENST00000560365 IGBP1P78318 339 aa13.35□□□□□ -0.27
IRF9-209ENST00000560365 MRPS6P82932 125 aaKnown RBP13.35□□□□□ -0.27
IRF9-209ENST00000560365 WTAPQ15007 396 aa13.35□□□□□ -0.27
IRF9-209ENST00000560365 PAN2Q504Q3 1202 aaKnown RBP13.35□□□□□ -0.27
IRF9-209ENST00000560365 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
IRF9-209ENST00000560365 SPOUT1Q5T280 376 aaKnown RBP13.35□□□□□ -0.27
IRF9-209ENST00000560365 RUFY4Q6ZNE9 571 aa13.35□□□□□ -0.27
IRF9-209ENST00000560365 RBM23Q86U06 439 aaKnown RBP13.35□□□□□ -0.27
IRF9-209ENST00000560365 EFHBQ8N7U6 833 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms