RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 IL31RAQ8NI17 732 aa11.86□□□□□ -0.51
CRTC3-209ENST00000560320 ZFP91Q96JP5 570 aaPredicted RBP11.86□□□□□ -0.51
CRTC3-209ENST00000560320 PPP1R9BQ96SB3 815 aa11.86□□□□□ -0.51
CRTC3-209ENST00000560320 PARK7Q99497 189 aaKnown RBP11.86□□□□□ -0.51
CRTC3-209ENST00000560320 MMP19Q99542 508 aa11.86□□□□□ -0.51
CRTC3-209ENST00000560320 TRIM9Q9C026 710 aa11.86□□□□□ -0.51
CRTC3-209ENST00000560320 TRIM5Q9C035 493 aa11.86□□□□□ -0.51
CRTC3-209ENST00000560320 AGO4Q9HCK5 861 aaKnown RBP11.86□□□□□ -0.51
CRTC3-209ENST00000560320 BLOC1S4Q9NUP1 217 aa11.86□□□□□ -0.51
CRTC3-209ENST00000560320 PLXNA1Q9UIW2 1896 aa11.86□□□□□ -0.51
CRTC3-209ENST00000560320 DOCK5Q9H7D0 1870 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 GOLGA6L6A8MZA4 724 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 BTBD19C9JJ37 291 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 DDX39AO00148 427 aaKnown RBP11.85□□□□□ -0.51
CRTC3-209ENST00000560320 MED24O75448 989 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 CNMDO75829 334 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 PLA2G4BP0C869 781 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 FCER1AP12319 257 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 IDEP14735 1019 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 ERCC3P19447 782 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 SFNP31947 248 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 ZNF157P51786 506 aaPredicted RBP11.85□□□□□ -0.51
CRTC3-209ENST00000560320 JAK3P52333 1124 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 ERVK-9P63128 1117 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 ERVK-24P63145 666 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 KRT76Q01546 638 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 KMT5BQ4FZB7 885 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 KLHL10Q6JEL2 608 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 UNC13DQ70J99 1090 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
CRTC3-209ENST00000560320 CATSPER3Q86XQ3 398 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 CCDC65Q8IXS2 484 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 GPRC5AQ8NFJ5 357 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 CCDC43Q96MW1 224 aaKnown RBP11.85□□□□□ -0.51
CRTC3-209ENST00000560320 MTRQ99707 1265 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 NUDT12Q9BQG2 462 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 UNC45AQ9H3U1 944 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 PKD2L1Q9P0L9 805 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 RBPJLQ9UBG7 517 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 SAMM50Q9Y512 469 aa11.85□□□□□ -0.51
CRTC3-209ENST00000560320 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 MANSC4A6NHS7 340 aaPredicted RBP11.84□□□□□ -0.51
CRTC3-209ENST00000560320 PSMA7O14818 248 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 CBFA2T2O43439 604 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 DKC1O60832 514 aaKnown RBP eCLIP11.84□□□□□ -0.51
CRTC3-209ENST00000560320 EIF3JO75822 258 aaKnown RBP11.84□□□□□ -0.51
CRTC3-209ENST00000560320 EYA4O95677 639 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
CRTC3-209ENST00000560320 ALDH5A1P51649 535 aaPredicted RBP11.84□□□□□ -0.51
CRTC3-209ENST00000560320 CYP4A11Q02928 519 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 PSMD2Q13200 908 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 DYMQ7RTS9 669 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 GPBP1Q86WP2 473 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 TPH2Q8IWU9 490 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 DRC7Q8IY82 874 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 SLC17A8Q8NDX2 589 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 RDM1Q8NG50 284 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 ENOX1Q8TC92 643 aaKnown RBP11.84□□□□□ -0.51
CRTC3-209ENST00000560320 BRI3BPQ8WY22 251 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 DYDC2Q96IM9 177 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 INPP4AQ96PE3 977 aaPredicted RBP11.84□□□□□ -0.51
CRTC3-209ENST00000560320 NACC1Q96RE7 527 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 IVNS1ABPQ9Y6Y0 642 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
CRTC3-209ENST00000560320 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 MYMKA6NI61 221 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 WDR64B1ANS9 1081 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 E9PMD0 336 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 EML1O00423 815 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 KIF20AO95235 890 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 TPM3P06753 285 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 P4HBP07237 508 aaKnown RBP11.83□□□□□ -0.52
CRTC3-209ENST00000560320 SPATA31C1P0DKV0 1188 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 BMP6P22004 513 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 CNTN2Q02246 1040 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 PAK1Q13153 545 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 CTTNQ14247 550 aaKnown RBP11.83□□□□□ -0.52
CRTC3-209ENST00000560320 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
CRTC3-209ENST00000560320 CST9Q5W186 159 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 ZNF746Q6NUN9 644 aaPredicted RBP11.83□□□□□ -0.52
CRTC3-209ENST00000560320 RGMBQ6NW40 437 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 KCNK18Q7Z418 384 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.83□□□□□ -0.52
CRTC3-209ENST00000560320 ANKRD20A12PQ8NF67 263 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 DDX12PQ92771 950 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
CRTC3-209ENST00000560320 CTNND2Q9UQB3 1225 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 MCM3APO60318 1980 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 NFASCO94856 1347 aa11.83□□□□□ -0.52
CRTC3-209ENST00000560320 BICDL2A1A5D9 508 aa11.82□□□□□ -0.52
CRTC3-209ENST00000560320 KLRC4O43908 158 aa11.82□□□□□ -0.52
CRTC3-209ENST00000560320 TBCAO75347 108 aaKnown RBP11.82□□□□□ -0.52
CRTC3-209ENST00000560320 CYP2C8P10632 490 aa11.82□□□□□ -0.52
CRTC3-209ENST00000560320 ZNF75DP51815 510 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms