RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 BTG3Q14201 252 aaPredicted RBP19.28■□□□□ 0.68
HERC1-207ENST00000560316 FCHSD1Q86WN1 690 aa19.28■□□□□ 0.68
HERC1-207ENST00000560316 MSLNLQ96KJ4 702 aa19.28■□□□□ 0.68
HERC1-207ENST00000560316 USP26Q9BXU7 913 aa19.28■□□□□ 0.68
HERC1-207ENST00000560316 MAP3K20Q9NYL2 800 aaKnown RBP19.28■□□□□ 0.68
HERC1-207ENST00000560316 TELO2Q9Y4R8 837 aa19.28■□□□□ 0.68
HERC1-207ENST00000560316 ADAM17P78536 824 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 ZXDAP98168 799 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 UTP14CQ5TAP6 766 aaKnown RBP19.27■□□□□ 0.68
HERC1-207ENST00000560316 CYFIP1Q7L576 1253 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 ADGRD2Q7Z7M1 963 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 SUGP1Q8IWZ8 645 aaKnown RBP19.27■□□□□ 0.68
HERC1-207ENST00000560316 LMBR1Q8WVP7 490 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 GPR20Q99678 358 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 FAM86C1Q9NVL1 165 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 ZSWIM5Q9P217 1185 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 ZBTB47Q9UFB7 747 aaPredicted RBP19.27■□□□□ 0.68
HERC1-207ENST00000560316 PLAGL2Q9UPG8 496 aa19.27■□□□□ 0.68
HERC1-207ENST00000560316 ENPP3O14638 875 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 ZBTB5O15062 677 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 EYA4O95677 639 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 DNAJB1P25685 340 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 RUFY4Q6ZNE9 571 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 ZNF689Q96CS4 500 aaPredicted RBP19.26■□□□□ 0.67
HERC1-207ENST00000560316 MTMR8Q96EF0 704 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 EHMT1Q9H9B1 1298 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 CLEC1BQ9P126 229 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 CFAP54Q96N23 3096 aa19.26■□□□□ 0.67
HERC1-207ENST00000560316 LOC730098B7Z3J9 87 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 KLRF2D3W0D1 207 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 GCOM1H8Y6P7 765 aaPredicted RBP19.25■□□□□ 0.67
HERC1-207ENST00000560316 POLR2MP0CAP2 368 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 RRP1P56182 461 aaKnown RBP19.25■□□□□ 0.67
HERC1-207ENST00000560316 MRPS9P82933 396 aaKnown RBP19.25■□□□□ 0.67
HERC1-207ENST00000560316 SEMA3FQ13275 785 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 LPIN1Q14693 890 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 METTL7BQ6UX53 244 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 PLVAPQ9BX97 442 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 RTEL1Q9NZ71 1219 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 ZDBF2Q9HCK1 2354 aa19.25■□□□□ 0.67
HERC1-207ENST00000560316 ITGB1P05556 798 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 SP4Q02446 784 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 NEDD9Q14511 834 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 PKN1Q16512 942 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 HOMER1Q86YM7 354 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 FBXL6Q8N531 539 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 SAMD3Q8N6K7 520 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 SMRP1Q8NCR6 262 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 RILPL2Q969X0 211 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 PRRX2Q99811 253 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 ZNF215Q9UL58 517 aaPredicted RBP19.24■□□□□ 0.67
HERC1-207ENST00000560316 BARX2Q9UMQ3 279 aaPredicted RBP19.24■□□□□ 0.67
HERC1-207ENST00000560316 MRPL42Q9Y6G3 142 aaKnown RBP19.24■□□□□ 0.67
HERC1-207ENST00000560316 DOCK5Q9H7D0 1870 aa19.24■□□□□ 0.67
HERC1-207ENST00000560316 SPATA31C2B4DYI2 1134 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 GFRA3O60609 400 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 DGKIO75912 1065 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 ICAM3P32942 547 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 NRIP1P48552 1158 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 MFAP1P55081 439 aaKnown RBP19.23■□□□□ 0.67
HERC1-207ENST00000560316 MGAT3Q09327 533 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 SLC35G1Q2M3R5 365 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 GNPTABQ3T906 1256 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 RBM23Q86U06 439 aaKnown RBP19.23■□□□□ 0.67
HERC1-207ENST00000560316 TICAM2Q86XR7 235 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 EFHBQ8N7U6 833 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 SPPL3Q8TCT6 385 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 PPP2R3CQ969Q6 453 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 INPP4AQ96PE3 977 aaPredicted RBP19.23■□□□□ 0.67
HERC1-207ENST00000560316 MAD2L2Q9UI95 211 aa19.23■□□□□ 0.67
HERC1-207ENST00000560316 TTC3P53804 2025 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 NT5C2P49902 561 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 VCPP55072 806 aaKnown RBP19.22■□□□□ 0.67
HERC1-207ENST00000560316 COASYQ13057 564 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 CBX2Q14781 532 aaPredicted RBP19.22■□□□□ 0.67
HERC1-207ENST00000560316 IFIT1BQ5T764 474 aaKnown RBP19.22■□□□□ 0.67
HERC1-207ENST00000560316 KLHL23Q8NBE8 558 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 LINC01599Q8WXQ3 324 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 P2RX5Q93086 422 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 PIGSQ96S52 555 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 UBAC1Q9BSL1 405 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 USP15Q9Y4E8 981 aaPredicted RBP19.22■□□□□ 0.67
HERC1-207ENST00000560316 PCDHGC5Q9Y5F6 944 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 KMT2EQ8IZD2 1858 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 ZFHX2Q9C0A1 2572 aaPredicted RBP19.22■□□□□ 0.67
HERC1-207ENST00000560316 NRCAMQ92823 1304 aa19.22■□□□□ 0.67
HERC1-207ENST00000560316 LAMA4Q16363 1823 aa19.21■□□□□ 0.67
HERC1-207ENST00000560316 GLP2RO95838 553 aa19.21■□□□□ 0.67
HERC1-207ENST00000560316 SDSP20132 328 aa19.21■□□□□ 0.67
HERC1-207ENST00000560316 PAN2Q504Q3 1202 aaKnown RBP19.21■□□□□ 0.67
HERC1-207ENST00000560316 FBXO47Q5MNV8 452 aa19.21■□□□□ 0.67
HERC1-207ENST00000560316 RPGRIP1Q96KN7 1286 aa19.21■□□□□ 0.67
HERC1-207ENST00000560316 PALM3A6NDB9 673 aaPredicted RBP19.2■□□□□ 0.66
HERC1-207ENST00000560316 FIBPO43427 364 aa19.2■□□□□ 0.66
HERC1-207ENST00000560316 SIGLEC14Q08ET2 396 aa19.2■□□□□ 0.66
HERC1-207ENST00000560316 TAF2Q6P1X5 1199 aa19.2■□□□□ 0.66
HERC1-207ENST00000560316 POF1BQ8WVV4 589 aa19.2■□□□□ 0.66
HERC1-207ENST00000560316 DNAJB3Q8WWF6 145 aa19.2■□□□□ 0.66
HERC1-207ENST00000560316 AGO3Q9H9G7 860 aaKnown RBP19.2■□□□□ 0.66
HERC1-207ENST00000560316 CDY2AQ9Y6F7 541 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms