RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 SEC63Q9UGP8 760 aaKnown RBP12.86□□□□□ -0.35
LINC02253-202ENST00000560314 FAM50BQ9Y247 325 aa12.86□□□□□ -0.35
LINC02253-202ENST00000560314 RWDD3Q9Y3V2 267 aa12.86□□□□□ -0.35
LINC02253-202ENST00000560314 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.85□□□□□ -0.35
LINC02253-202ENST00000560314 E7EWF7 191 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 NCK2O43639 380 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 GNAQP50148 359 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 COL19A1Q14993 1142 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 PTCRAQ6ISU1 281 aaPredicted RBP12.85□□□□□ -0.35
LINC02253-202ENST00000560314 RSPH3Q86UC2 560 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 NLRX1Q86UT6 975 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 TMEM192Q8IY95 271 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 GJD3Q8N144 294 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 BANK1Q8NDB2 785 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 CTCFLQ8NI51 663 aaPredicted RBP12.85□□□□□ -0.35
LINC02253-202ENST00000560314 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
LINC02253-202ENST00000560314 EXOC6Q8TAG9 804 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 GPRASP2Q96D09 838 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 PABPC5Q96DU9 382 aaKnown RBP12.85□□□□□ -0.35
LINC02253-202ENST00000560314 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
LINC02253-202ENST00000560314 SENP2Q9HC62 589 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 C11orf16Q9NQ32 467 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 SETD4Q9NVD3 440 aa12.85□□□□□ -0.35
LINC02253-202ENST00000560314 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 C5orf67F2Z3F1 127 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 MEIS2O14770 477 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 ALADP13716 330 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 IL9P15248 144 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 CHMLP26374 656 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 PTH1RQ03431 593 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 GPM6BQ13491 265 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 MB21D2Q8IYB1 491 aaPredicted RBP12.84□□□□□ -0.35
LINC02253-202ENST00000560314 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC02253-202ENST00000560314 ZFP91Q96JP5 570 aaPredicted RBP12.84□□□□□ -0.35
LINC02253-202ENST00000560314 C11orf84Q9BUA3 381 aaPredicted RBP12.84□□□□□ -0.35
LINC02253-202ENST00000560314 CD320Q9NPF0 282 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 PRKAG3Q9UGI9 489 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 ADGRA3Q8IWK6 1321 aa12.84□□□□□ -0.35
LINC02253-202ENST00000560314 MBLAC1A4D2B0 266 aaPredicted RBP12.83□□□□□ -0.36
LINC02253-202ENST00000560314 SGSM2O43147 1006 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 UPP2O95045 317 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 RB1P06400 928 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 SSTR3P32745 418 aaPredicted RBP12.83□□□□□ -0.36
LINC02253-202ENST00000560314 ANTXR2P58335 489 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 TMTC2Q8N394 836 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 IL17RAQ96F46 866 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 BCAS3Q9H6U6 928 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 ERAP1Q9NZ08 941 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 TUBE1Q9UJT0 475 aa12.83□□□□□ -0.36
LINC02253-202ENST00000560314 MAFGO15525 162 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 CHRNA1P02708 482 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 CALM1P0DP23 149 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 CALM2P0DP24 149 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 CALM3P0DP25 149 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 KCNA2P16389 499 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 PDE4AP27815 886 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 CTNNB1P35222 781 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 TCF7P36402 384 aaPredicted RBP12.82□□□□□ -0.36
LINC02253-202ENST00000560314 SP4Q02446 784 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 MGAT3Q09327 533 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 PPFIA1Q13136 1202 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 TCEAL5Q5H9L2 206 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 UTP14CQ5TAP6 766 aaKnown RBP12.82□□□□□ -0.36
LINC02253-202ENST00000560314 CASC1Q6TDU7 716 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 TEX2Q8IWB9 1127 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 FIBCD1Q8N539 461 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 SEPT1Q8WYJ6 367 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 CLP1Q92989 425 aaKnown RBP12.82□□□□□ -0.36
LINC02253-202ENST00000560314 RC3H2Q9HBD1 1191 aaKnown RBP12.82□□□□□ -0.36
LINC02253-202ENST00000560314 LY9Q9HBG7 655 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
LINC02253-202ENST00000560314 LINC00271P0C7V0 271 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 GHRP10912 638 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 MTMR1Q13613 665 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 GRIK4Q16099 956 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 TSHZ1Q6ZSZ6 1077 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 FAM43BQ6ZT52 329 aaPredicted RBP12.81□□□□□ -0.36
LINC02253-202ENST00000560314 PIBF1Q8WXW3 757 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 MAP4K1Q92918 833 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
LINC02253-202ENST00000560314 TMEM87BQ96K49 555 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 OSBPL7Q9BZF2 842 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 SMARCAD1Q9H4L7 1026 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 PSTPIP2Q9H939 334 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 TAF6LQ9Y6J9 622 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 SQORQ9Y6N5 450 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 ZNF318Q5VUA4 2279 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 KIAA1671Q9BY89 1806 aa12.81□□□□□ -0.36
LINC02253-202ENST00000560314 FAM86C2PA6NEL3 165 aa12.8□□□□□ -0.36
LINC02253-202ENST00000560314 SPDYE3A6NKU9 549 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms