RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 PORCNQ9H237 461 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 CLSTN2Q9H4D0 955 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 MAGEF1Q9HAY2 307 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 KCNH7Q9NS40 1196 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 TMEM63CQ9P1W3 806 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 HPSEQ9Y251 543 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 MRVI1Q9Y6F6 885 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 KDM3AQ9Y4C1 1321 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 EDIL3O43854 480 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 MSCO60682 206 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 PEX10O60683 326 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 HMGCRP04035 888 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 SLFN14P0C7P3 912 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 TGFB3P10600 412 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 ITGB5P18084 799 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 ADORA2AP29274 412 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 CTGFP29279 349 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 GRK4P32298 578 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 FLT3LGP49771 235 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 MRPS9P82933 396 aaKnown RBP7.22□□□□□ -1.25
SPG11-221ENST00000560299 KRT76Q01546 638 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 CNTN2Q02246 1040 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 GRIN1Q05586 938 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 PPP2R5CQ13362 524 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 IL17AQ16552 155 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 ZSCAN23Q3MJ62 389 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 SASS6Q6UVJ0 657 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 KRBA2Q6ZNG9 492 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 PDILTQ8N807 584 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 CYP2W1Q8TAV3 490 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 NEK9Q8TD19 979 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 SNX29Q8TEQ0 813 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 SLC5A5Q92911 643 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 LENG9Q96B70 501 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 INPP4AQ96PE3 977 aaPredicted RBP7.22□□□□□ -1.25
SPG11-221ENST00000560299 APBA2Q99767 749 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 PANK2Q9BZ23 570 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 GOLPH3LQ9H4A5 285 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 AGO4Q9HCK5 861 aaKnown RBP7.22□□□□□ -1.25
SPG11-221ENST00000560299 DISC1Q9NRI5 854 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 STK17AQ9UEE5 414 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 TSKSQ9UJT2 592 aa7.22□□□□□ -1.25
SPG11-221ENST00000560299 SOWAHBA6NEL2 793 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 DKC1O60832 514 aaKnown RBP eCLIP7.21□□□□□ -1.26
SPG11-221ENST00000560299 PSMD10O75832 226 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 SMC2O95347 1197 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 MYL1P05976 194 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 PGK2P07205 417 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 GJB1P08034 283 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 CCDC192P0DO97 292 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 ARP10275 920 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 MUTP22033 750 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 EDNRBP24530 442 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 RPA1P27694 616 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 SFNP31947 248 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 ICAM3P32942 547 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 CCT6AP40227 531 aaKnown RBP7.21□□□□□ -1.26
SPG11-221ENST00000560299 JAK3P52333 1124 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 NKX3-2P78367 333 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 CAP1Q01518 475 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 PRKCZQ05513 592 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 NEDD9Q14511 834 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 EPHA7Q15375 998 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 CAMK4Q16566 473 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 LONRF3Q496Y0 759 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 NCAPH2Q6IBW4 605 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 MIER3Q7Z3K6 550 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 ANKLE1Q8NAG6 615 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 RDM1Q8NG50 284 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 IL31RAQ8NI17 732 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 RAET1EQ8TD07 263 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 MORC4Q8TE76 937 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 CCDC47Q96A33 483 aaKnown RBP7.21□□□□□ -1.26
SPG11-221ENST00000560299 DHX58Q96C10 678 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 PURBQ96QR8 312 aaKnown RBP7.21□□□□□ -1.26
SPG11-221ENST00000560299 SENP7Q9BQF6 1050 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 GTPBP4Q9BZE4 634 aaKnown RBP7.21□□□□□ -1.26
SPG11-221ENST00000560299 PAK6Q9NQU5 681 aaPredicted RBP7.21□□□□□ -1.26
SPG11-221ENST00000560299 SAMM50Q9Y512 469 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 KIAA0100Q14667 2235 aaKnown RBP7.21□□□□□ -1.26
SPG11-221ENST00000560299 NFASCO94856 1347 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 SYNGAP1Q96PV0 1343 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 CENPFP49454 3210 aa7.21□□□□□ -1.26
SPG11-221ENST00000560299 DOCK3Q8IZD9 2030 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 PLXNB2O15031 1838 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 SYCE3A1L190 88 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 WDR64B1ANS9 1081 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 SPATA31C2B4DYI2 1134 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 ADCY3O60266 1144 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 CAVIN2O95810 425 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
SPG11-221ENST00000560299 CDC25AP30304 524 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 ZNF445P59923 1031 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 SEMA3FQ13275 785 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 TTLL4Q14679 1199 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 KARSQ15046 597 aaKnown RBP7.2□□□□□ -1.26
SPG11-221ENST00000560299 ZNF792Q3KQV3 632 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 SLC9C1Q4G0N8 1177 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 HYIQ5T013 277 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 ZNF746Q6NUN9 644 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms