RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	GPR20	Q99678	358 aa		13.83	□□□□□ -0.2
USP8-209	ENST00000560297	RAB34	Q9BZG1	259 aa		13.83	□□□□□ -0.2
USP8-209	ENST00000560297	TFIP11	Q9UBB9	837 aa	Known RBP	13.83	□□□□□ -0.2
USP8-209	ENST00000560297	CLIC4	Q9Y696	253 aa		13.83	□□□□□ -0.2
USP8-209	ENST00000560297	MYH7B	A7E2Y1	1941 aa		13.83	□□□□□ -0.2
USP8-209	ENST00000560297	MCM3AP	O60318	1980 aa		13.83	□□□□□ -0.2
USP8-209	ENST00000560297	HTT	P42858	3142 aa		13.83	□□□□□ -0.2
USP8-209	ENST00000560297	POTEF	A5A3E0	1075 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	MOXD2P	A6NHM9	499 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	WDR64	B1ANS9	1081 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	KBTBD13	C9JR72	458 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	DDX39A	O00148	427 aa	Known RBP	13.82	□□□□□ -0.2
USP8-209	ENST00000560297	DNM1L	O00429	736 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	CTAGE5	O15320	804 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	SORBS3	O60504	671 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	YEATS4	O95619	227 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	PSAP	P07602	524 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	MMP3	P08254	477 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	HOXD8	P13378	290 aa	Predicted RBP	13.82	□□□□□ -0.2
USP8-209	ENST00000560297	FXR2	P51116	673 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
USP8-209	ENST00000560297	KRT85	P78386	507 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	SP4	Q02446	784 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	CEBPZ	Q03701	1054 aa	Known RBP	13.82	□□□□□ -0.2
USP8-209	ENST00000560297	DNM1	Q05193	864 aa	Known RBP	13.82	□□□□□ -0.2
USP8-209	ENST00000560297	PTPA	Q15257	358 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	KCNA10	Q16322	511 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.82	□□□□□ -0.2
USP8-209	ENST00000560297	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.82	□□□□□ -0.2
USP8-209	ENST00000560297	B3GNT9	Q6UX72	402 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.82	□□□□□ -0.2
USP8-209	ENST00000560297	ANKLE1	Q8NAG6	615 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	LINC00301	Q8NCQ3	95 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	GJA10	Q969M2	543 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	FERMT2	Q96AC1	680 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	DISC1	Q9NRI5	854 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	PCDHA10	Q9Y5I2	948 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	STK24	Q9Y6E0	443 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	ELP1	O95163	1332 aa		13.82	□□□□□ -0.2
USP8-209	ENST00000560297	GSTTP1	A0A1W2PQM5	241 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	CABYR	O75952	493 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	CCNE2	O96020	404 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	PTGS1	P23219	599 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	TEC	P42680	631 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	BEX3	Q00994	111 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	SPIRE1	Q08AE8	756 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	STK38	Q15208	465 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	ABHD15	Q6UXT9	468 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	MIER3	Q7Z3K6	550 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	KCNG4	Q8TDN1	519 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.81	□□□□□ -0.2
USP8-209	ENST00000560297	UNC45A	Q9H3U1	944 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	AZI2	Q9H6S1	392 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	VAV3	Q9UKW4	847 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	SAMM50	Q9Y512	469 aa		13.81	□□□□□ -0.2
USP8-209	ENST00000560297	IGKV6D-21	A0A0A0MT36	114 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	MYADML2	A6NDP7	307 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	SPTLC2	O15270	562 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	PPP6R2	O75170	966 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	LGR5	O75473	907 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	MYL3	P08590	195 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	SUPT20HL2	P0C7V6	817 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	TCF7	P36402	384 aa	Predicted RBP	13.8	□□□□□ -0.2
USP8-209	ENST00000560297	EPHA7	Q15375	998 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	PLPPR4	Q7Z2D5	763 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	IGSF22	Q8N9C0	903 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	AK8	Q96MA6	479 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	MTG1	Q9BT17	334 aa	Predicted RBP	13.8	□□□□□ -0.2
USP8-209	ENST00000560297	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
USP8-209	ENST00000560297	SMARCAD1	Q9H4L7	1026 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	RCOR1	Q9UKL0	485 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	SRPRB	Q9Y5M8	271 aa	Known RBP	13.8	□□□□□ -0.2
USP8-209	ENST00000560297	LRRC37A2	A6NM11	1700 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	KIAA1217	Q5T5P2	1943 aa		13.8	□□□□□ -0.2
USP8-209	ENST00000560297	BACH1	O14867	736 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	CHMP2A	O43633	222 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	DKC1	O60832	514 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	ASGR1	P07306	291 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	NCL	P19338	710 aa	Known RBP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	MARCKS	P29966	332 aa	Predicted RBP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	LONP1	P36776	959 aa	Known RBP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	SLC26A2	P50443	739 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	STAT5B	P51692	787 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	ACLY	P53396	1101 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	IRX5	P78411	483 aa	Predicted RBP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	PURA	Q00577	322 aa	Known RBP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	FAM160B1	Q5W0V3	765 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	NCAPH2	Q6IBW4	605 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	SWSAP1	Q6NVH7	229 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	KRI1	Q8N9T8	703 aa	Known RBP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	ERMN	Q8TAM6	284 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	GLG1	Q92896	1179 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	TNPO1	Q92973	898 aa	Known RBP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	KATNAL1	Q9BW62	490 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	LRWD1	Q9UFC0	647 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	ZNF215	Q9UL58	517 aa	Predicted RBP	13.79	□□□□□ -0.2
USP8-209	ENST00000560297	PHF24	Q9UPV7	400 aa		13.79	□□□□□ -0.2
USP8-209	ENST00000560297	VWA3A	A6NCI4	1184 aa		13.78	□□□□□ -0.2
USP8-209	ENST00000560297		H3BRB1	525 aa		13.78	□□□□□ -0.2
USP8-209	ENST00000560297	EML1	O00423	815 aa		13.78	□□□□□ -0.2
USP8-209	ENST00000560297	LGALS2	P05162	132 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms