RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ERLIN1O75477 346 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 SSBP05455 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMAD3-212ENST00000559937 KRT18P05783 430 aaKnown RBP8.94□□□□□ -0.98
SMAD3-212ENST00000559937 JAG1P78504 1218 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 MAP3K10Q02779 954 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 KIF5AQ12840 1032 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 GIT2Q14161 759 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 PRR16Q569H4 304 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 ARSHQ5FYA8 562 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 HERC4Q5GLZ8 1057 aaPredicted RBP8.94□□□□□ -0.98
SMAD3-212ENST00000559937 CC2D1AQ6P1N0 951 aaPredicted RBP8.94□□□□□ -0.98
SMAD3-212ENST00000559937 EPM2AIP1Q7L775 607 aaPredicted RBP8.94□□□□□ -0.98
SMAD3-212ENST00000559937 CATSPER3Q86XQ3 398 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 OGFOD1Q8N543 542 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 SAMD3Q8N6K7 520 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 ATRIPQ8WXE1 791 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 BAP1Q92560 729 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 CCDC42Q96M95 316 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 P2RX7Q99572 595 aaKnown RBP8.94□□□□□ -0.98
SMAD3-212ENST00000559937 ARID3AQ99856 593 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 VCPKMTQ9H867 229 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 ARFGAP3Q9NP61 516 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 LUC7LQ9NQ29 371 aaKnown RBP8.94□□□□□ -0.98
SMAD3-212ENST00000559937 OLFML3Q9NRN5 406 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 EMILIN3Q9NT22 766 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 ZNF219Q9P2Y4 722 aaPredicted RBP8.94□□□□□ -0.98
SMAD3-212ENST00000559937 VAV3Q9UKW4 847 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 ZBTB21Q9ULJ3 1066 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 GUCA1BQ9UMX6 200 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 FHOD1Q9Y613 1164 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 UBE4BO95155 1302 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 COL4A5P29400 1685 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 IGLV3-22A0A075B6J6 115 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 POTEFA5A3E0 1075 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 FAM86B1E9PN63 330 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 GCOM1H8Y6P7 765 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 EIF3DO15371 548 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 SLC16A3O15427 465 aaKnown RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 C21orf2O43822 256 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 CALUO43852 315 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 TACC1O75410 805 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 FAM86B2P0C5J1 330 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 POLR2MP0CAP2 368 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 POTEIP0CG38 1075 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 SPATA31C1P0DKV0 1188 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 PRLRP16471 622 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 ZSCAN20P17040 1043 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 MCM3P25205 808 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 ANXA13P27216 316 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 ZNF76P36508 570 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 KLK7P49862 253 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 SETQ01105 290 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 DMTNQ08495 405 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 PPP2R5CQ13362 524 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 RRP1BQ14684 758 aaKnown RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 LRRC41Q15345 812 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 NFIL3Q16649 462 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 USH1GQ495M9 461 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 NCAPH2Q6IBW4 605 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 IQCEQ6IPM2 695 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 POTEGQ6S5H5 508 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 POTEEQ6S8J3 1075 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 CACNA2D4Q7Z3S7 1137 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 FRMD5Q7Z6J6 570 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 CCDC155Q8N6L0 562 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 TRIM58Q8NG06 486 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 NEK9Q8TD19 979 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 SCFD1Q8WVM8 642 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 RUBCNQ92622 972 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 SLC5A5Q92911 643 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 SECISBP2LQ93073 1101 aaKnown RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 ZBED3Q96IU2 234 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 PARD6BQ9BYG5 372 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 WDR11Q9BZH6 1224 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 MMRN2Q9H8L6 949 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 METTL14Q9HCE5 456 aaKnown RBP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 PLCB1Q9NQ66 1216 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 ARHGAP20Q9P2F6 1191 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 SEL1LQ9UBV2 794 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 FEM1BQ9UK73 627 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 DAAM1Q9Y4D1 1078 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMAD3-212ENST00000559937 SAR1BQ9Y6B6 198 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 ATP8B3O60423 1300 aa8.93□□□□□ -0.98
SMAD3-212ENST00000559937 FRMPD4Q14CM0 1322 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 LRRC53A6NM62 1247 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 TCP10L2B9ZVM9 353 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 RBAK-RBAKDNI3L0D1 243 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 TBCAO75347 108 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 PSMD10O75832 226 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 TBC1D8O95759 1140 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 ABL1P00519 1130 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 SERPING1P05155 500 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 RPL13P26373 211 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 EIF4A3P38919 411 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 CAP2P40123 477 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 STAT3P40763 770 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 KIF11P52732 1056 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 GHRHRQ02643 423 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 ITIH3Q06033 890 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms