RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SHCBP1Q8NEM2 672 aa19.85■□□□□ 0.77
SNX1-208ENST00000559844 LARP4BQ92615 738 aaKnown RBP19.85■□□□□ 0.77
SNX1-208ENST00000559844 ACAD9Q9H845 621 aa19.85■□□□□ 0.77
SNX1-208ENST00000559844 ADD3Q9UEY8 706 aaKnown RBP19.85■□□□□ 0.77
SNX1-208ENST00000559844 PVALEFA0A1B0GWK0 134 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 PIK3CDO00329 1044 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 TBX3O15119 743 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 ARHGAP4P98171 946 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 PDE4DQ08499 809 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 COBLL1Q53SF7 1204 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 CNNM4Q6P4Q7 775 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 CHST13Q8NET6 341 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 NOC3LQ8WTT2 800 aaKnown RBP19.84■□□□□ 0.77
SNX1-208ENST00000559844 CRYGNQ8WXF5 182 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 CLEC4DQ8WXI8 215 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 RAD54LQ92698 747 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 NT5C3AQ9H0P0 336 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 MROH8Q9H579 483 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 KCNMB3Q9NPA1 279 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 BLOC1S4Q9NUP1 217 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 TSKSQ9UJT2 592 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 OPLAHO14841 1288 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 CCP110O43303 1012 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 SREBF1P36956 1147 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 Q4G0T1 1027 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 HYIQ5T013 277 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 CCAR2Q8N163 923 aaKnown RBP19.84■□□□□ 0.77
SNX1-208ENST00000559844 TMX1Q9H3N1 280 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 FBXO40Q9UH90 709 aa19.84■□□□□ 0.77
SNX1-208ENST00000559844 BICDL2A1A5D9 508 aa19.83■□□□□ 0.77
SNX1-208ENST00000559844 LRRC10BA6NIK2 292 aa19.83■□□□□ 0.77
SNX1-208ENST00000559844 STK24Q9Y6E0 443 aa19.83■□□□□ 0.77
SNX1-208ENST00000559844 MAPK4P31152 587 aa19.83■□□□□ 0.76
SNX1-208ENST00000559844 NSMFQ6X4W1 530 aa19.83■□□□□ 0.76
SNX1-208ENST00000559844 THAP9Q9H5L6 903 aa19.83■□□□□ 0.76
SNX1-208ENST00000559844 KCNJ18B7U540 433 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 GPR25O00155 361 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 CFBP00751 764 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 TNNT1P13805 278 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 SP3Q02447 781 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 KCNJ12Q14500 433 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 MCM6Q14566 821 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 TCP11X2Q5H9J9 407 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 UNC13DQ70J99 1090 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 C16orf45Q96MC5 204 aaPredicted RBP19.82■□□□□ 0.76
SNX1-208ENST00000559844 MAPK8IP1Q9UQF2 711 aa19.82■□□□□ 0.76
SNX1-208ENST00000559844 UQCRHLA0A096LP55 91 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 KIF2AO00139 706 aaPredicted RBP19.81■□□□□ 0.76
SNX1-208ENST00000559844 UQCRHP07919 91 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 CIITAP33076 1130 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 PBX1P40424 430 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 LACTBP83111 547 aaPredicted RBP19.81■□□□□ 0.76
SNX1-208ENST00000559844 KRT31Q15323 416 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 GPR142Q7Z601 462 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 FCHSD1Q86WN1 690 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 MCF2L2Q86YR7 1114 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 ANKRD35Q8N283 1001 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 TBC1D5Q92609 795 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 A1CFQ9NQ94 594 aaKnown RBP19.81■□□□□ 0.76
SNX1-208ENST00000559844 IVNS1ABPQ9Y6Y0 642 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 ITIH6Q6UXX5 1313 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 LCTP09848 1927 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 PLXNA1Q9UIW2 1896 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 CYP3A4P08684 503 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 CCNE1P24864 410 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 CCT6AP40227 531 aaKnown RBP19.81■□□□□ 0.76
SNX1-208ENST00000559844 PTPN14Q15678 1187 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 RNF207Q6ZRF8 634 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 MYRIPQ8NFW9 859 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 TRIM47Q96LD4 638 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 FAM20AQ96MK3 541 aa19.81■□□□□ 0.76
SNX1-208ENST00000559844 MYMKA6NI61 221 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 N4BP3O15049 544 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 FCER1AP12319 257 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 EEF1GP26641 437 aaKnown RBP19.8■□□□□ 0.76
SNX1-208ENST00000559844 HOXA13P31271 388 aaPredicted RBP19.8■□□□□ 0.76
SNX1-208ENST00000559844 COPB1P53618 953 aaKnown RBP19.8■□□□□ 0.76
SNX1-208ENST00000559844 KCTD2Q14681 263 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 HAUS3Q68CZ6 603 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 SLC30A10Q6XR72 485 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 PPFIBP1Q86W92 1011 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 P2RX5Q93086 422 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 MMP19Q99542 508 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 NUDT12Q9BQG2 462 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 ARHGAP39Q9C0H5 1083 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 EHMT1Q9H9B1 1298 aa19.8■□□□□ 0.76
SNX1-208ENST00000559844 MAGEC2Q9UBF1 373 aaPredicted RBP19.8■□□□□ 0.76
SNX1-208ENST00000559844 USP27XA6NNY8 438 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 ARHGAP6O43182 974 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 TEX33O43247 280 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 PSMD2Q13200 908 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 E4F1Q66K89 784 aaPredicted RBP19.79■□□□□ 0.76
SNX1-208ENST00000559844 NYAP1Q6ZVC0 841 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 PLEKHH3Q7Z736 793 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 ERMNQ8TAM6 284 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 ETNPPLQ8TBG4 499 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 CYP39A1Q9NYL5 469 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 PAXBP1Q9Y5B6 917 aa19.79■□□□□ 0.76
SNX1-208ENST00000559844 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.79■□□□□ 0.765e-7■■□□□ 13.4
SNX1-208ENST00000559844 AKR1B15C9JRZ8 316 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms