RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 DHX37Q8IY37 1157 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 SMAP1Q8IYB5 467 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 TEKT3Q9BXF9 490 aa16.71■□□□□ 0.27
SNRPA1-207ENST00000559309 SCN10AQ9Y5Y9 1956 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 SPTLC2O15270 562 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 MMP3P08254 477 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 RARBP10826 455 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 SFNP31947 248 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 TXKP42681 527 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 MNX1P50219 401 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 ACTR2P61160 394 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 IRX5P78411 483 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 GRIN1Q05586 938 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 KCNG4Q8TDN1 519 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 PCYT2Q99447 389 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 HSD17B14Q9BPX1 270 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 SDF4Q9BRK5 362 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 SCAND2PQ9GZW5 306 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
SNRPA1-207ENST00000559309 MYADML2A6NDP7 307 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 PPFIA4O75335 1185 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 LONP1P36776 959 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 DTHD1Q6ZMT9 781 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 AFAP1L1Q8TED9 768 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 SEPT1Q8WYJ6 367 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 AK8Q96MA6 479 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 C16orf70Q9BSU1 422 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 MMTAG2Q9BU76 263 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 XPNPEP3Q9NQH7 507 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 PKD2L1Q9P0L9 805 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 PCDHA10Q9Y5I2 948 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 IGSF9BQ9UPX0 1349 aa16.69■□□□□ 0.26
SNRPA1-207ENST00000559309 FAM237AA0A1B0GTK4 181 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 POTEMA6NI47 508 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 WDR64B1ANS9 1081 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 DYNC1LI2O43237 492 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 SGPL1O95470 568 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 SUPT20HL2P0C7V6 817 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 SPATA31C1P0DKV0 1188 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 CNGA1P29973 690 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 TECP42680 631 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 GJA8P48165 433 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 JAK3P52333 1124 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 CEBPZQ03701 1054 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 LRRC41Q15345 812 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 EPHA7Q15375 998 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 HYIQ5T013 277 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 OR6J1Q8NGC5 347 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 SPATA33Q96N06 139 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 UIMC1Q96RL1 719 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 RNF208Q9H0X6 261 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 MLXIPQ9HAP2 919 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 PCDHA7Q9UN72 937 aa16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 MAFBQ9Y5Q3 323 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-207ENST00000559309 HAS3O00219 553 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 SLC26A4O43511 780 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 STBD1O95210 358 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 LYPLA2O95372 231 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 PGK1P00558 417 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 MUTP22033 750 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 MARCKSP29966 332 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 CPT1AP50416 773 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 STK38Q15208 465 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 FSCN1Q16658 493 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 CCDC60Q8IWA6 550 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 KRI1Q8N9T8 703 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 KAT2BQ92831 832 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 DEFB118Q96PH6 123 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 TSEN34Q9BSV6 310 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 POLR3CQ9BUI4 534 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 DISC1Q9NRI5 854 aa16.67■□□□□ 0.26
SNRPA1-207ENST00000559309 VWA3AA6NCI4 1184 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 CUTAO60888 179 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 SLITRK3O94933 977 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 F2P00734 622 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 ATP4AP20648 1035 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 TCF7P36402 384 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 PURAQ00577 322 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 ADALQ6DHV7 355 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 PLPPR4Q7Z2D5 763 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 SPATA32Q96LK8 384 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 CCSER1Q9C0I3 900 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 AP5M1Q9H0R1 490 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 CSRNP2Q9H175 543 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 WRAP73Q9P2S5 460 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 LRWD1Q9UFC0 647 aa16.66■□□□□ 0.26
SNRPA1-207ENST00000559309 DDX39AO00148 427 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 ZNF862O60290 1169 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 KPNA6O60684 536 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 LGALS2P05162 132 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms