RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 C11orf16Q9NQ32 467 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 CTNNA3Q9UI47 895 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 NOD1Q9Y239 953 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 PCDHA1Q9Y5I3 950 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 ATP6V1DQ9Y5K8 247 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 COL4A6Q14031 1691 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 NLRC5Q86WI3 1866 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 UQCRHLA0A096LP55 91 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 ABHD14A-ACY1A0A1B0GW23 586 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 HIP1O00291 1037 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 DHX16O60231 1041 aaKnown RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 PRPF40AO75400 957 aaKnown RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 LGR5O75473 907 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 GGPS1O95749 300 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 UQCRHP07919 91 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 LINC00271P0C7V0 271 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 MYCLP12524 364 aaPredicted RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 CHMLP26374 656 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 ADAM17P78536 824 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 HTRA4P83105 476 aaPredicted RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 UTP14CQ5TAP6 766 aaKnown RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 HOMER1Q86YM7 354 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 SAMD3Q8N6K7 520 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 CCDC155Q8N6L0 562 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 DBF4BQ8NFT6 615 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 SP7Q8TDD2 431 aaPredicted RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 IGDCC4Q8TDY8 1250 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 TMX3Q96JJ7 454 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 SPATA33Q96N06 139 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 RAD9AQ99638 391 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 C17orf80Q9BSJ5 609 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 UBAC1Q9BSL1 405 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 RNPEPQ9H4A4 650 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 MAP3K20Q9NYL2 800 aaKnown RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.72□□□□□ -1.33
USP3-212ENST00000559276 NCOR1O75376 2440 aa6.72□□□□□ -1.33
USP3-212ENST00000559276 C5orf42Q9H799 3197 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 SPATA31C2B4DYI2 1134 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 KIF28PB7ZC32 967 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 E7EWF7 191 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 TREHO43280 583 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 GTPBP6O43824 516 aaPredicted RBP6.71□□□□□ -1.34
USP3-212ENST00000559276 PARNO95453 639 aaKnown RBP6.71□□□□□ -1.34
USP3-212ENST00000559276 LGALS2P05162 132 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 SMIM10L2AP0DMW4 78 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 SMIM10L2BP0DMW5 78 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 TGFB3P10600 412 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 ICAM3P32942 547 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 KCNJ6P48051 423 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 SKIV2LQ15477 1246 aaKnown RBP6.71□□□□□ -1.34
USP3-212ENST00000559276 PLEKHG4Q58EX7 1191 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 CCDC183Q5T5S1 534 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 FAM117BQ6P1L5 589 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 FCHSD1Q86WN1 690 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 TRIM50Q86XT4 487 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 MB21D2Q8IYB1 491 aaPredicted RBP6.71□□□□□ -1.34
USP3-212ENST00000559276 MYRIPQ8NFW9 859 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 PIBF1Q8WXW3 757 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 HLA-CQ95604 372 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 INPP4AQ96PE3 977 aaPredicted RBP6.71□□□□□ -1.34
USP3-212ENST00000559276 GPR20Q99678 358 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 ESYT1Q9BSJ8 1104 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 KATNAL1Q9BW62 490 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 SPTLC3Q9NUV7 552 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 LMCD1Q9NZU5 365 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 TMEM63CQ9P1W3 806 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 USP25Q9UHP3 1055 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 MTUS1Q9ULD2 1270 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 COG5Q9UP83 839 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 ZDHHC9Q9Y397 364 aa6.71□□□□□ -1.34
USP3-212ENST00000559276 R3HCC1Q9Y3T6 440 aaKnown RBP6.71□□□□□ -1.34
USP3-212ENST00000559276 RALGAPA2Q2PPJ7 1873 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 BRWD1Q9NSI6 2320 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 RSPH10B2B2RC85 870 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 H3BRB1 525 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 GCOM1H8Y6P7 765 aaPredicted RBP6.7□□□□□ -1.34
USP3-212ENST00000559276 MEIS2O14770 477 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 IFIT3O14879 490 aaKnown RBP6.7□□□□□ -1.34
USP3-212ENST00000559276 SGSM2O43147 1006 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 ATP9AO75110 1047 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 PTMAP06454 111 aaKnown RBP6.7□□□□□ -1.34
USP3-212ENST00000559276 RSPH10BP0C881 870 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 POLR2MP0CAP2 368 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 CCND2P30279 289 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 THPOP40225 353 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 IKBKEQ14164 716 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 AAK1Q2M2I8 961 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 KCNV1Q6PIU1 500 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 USP17L6PQ6QN14 398 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 CYFIP1Q7L576 1253 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.7□□□□□ -1.34
USP3-212ENST00000559276 MAP4K1Q92918 833 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 ATP6V0A1Q93050 837 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 TOP1MTQ969P6 601 aa6.7□□□□□ -1.34
USP3-212ENST00000559276 TGS1Q96RS0 853 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms