RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 IL17RAQ96F46 866 aa18.77■□□□□ 0.6
CDC42BPB-205ENST00000559245 CLDND1Q9NY35 253 aa18.77■□□□□ 0.6
CDC42BPB-205ENST00000559245 ERICH2A1L162 156 aa18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 DCXO43602 365 aa18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 CTNNB1P35222 781 aa18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 SP4Q02446 784 aa18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 TROAPQ12815 778 aa18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 PRKAG3Q9UGI9 489 aa18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 SUPT16HQ9Y5B9 1047 aaKnown RBP18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 ZNF318Q5VUA4 2279 aa18.76■□□□□ 0.59
CDC42BPB-205ENST00000559245 NRCAMQ92823 1304 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 POTEB3A0JP26 581 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 CHRNA1P02708 482 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 RB1P06400 928 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 CYP21A2P08686 494 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 ZP2Q05996 745 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 WTAPQ15007 396 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 POTEBQ6S5H4 581 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 RPAINQ86UA6 219 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 ALYREFQ86V81 257 aaKnown RBP18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 SENP7Q9BQF6 1050 aa18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 U3KPZ7 1027 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-205ENST00000559245 C5orf67F2Z3F1 127 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 NCK2O43639 380 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 LINC00271P0C7V0 271 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 GHRP10912 638 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 BMPR1AP36894 532 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 LTBRP36941 435 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 PCNX4Q63HM2 1172 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 USP17L6PQ6QN14 398 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 SMARCC2Q8TAQ2 1214 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 C11orf84Q9BUA3 381 aaPredicted RBP18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 LMAN2LQ9H0V9 348 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 RWDD3Q9Y3V2 267 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 TRIOO75962 3097 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 ADGRA3Q8IWK6 1321 aa18.74■□□□□ 0.59
CDC42BPB-205ENST00000559245 C19orf67A6NJJ6 358 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 GRM6O15303 877 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 SART3Q15020 963 aaKnown RBP18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 XRRA1Q6P2D8 792 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 RUFY4Q6ZNE9 571 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 CATIPQ7Z7H3 387 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 RALYLQ86SE5 291 aaKnown RBP18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 NLRX1Q86UT6 975 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 ADHFE1Q8IWW8 467 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 CUL5Q93034 780 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 EHMT1Q9H9B1 1298 aa18.73■□□□□ 0.59
CDC42BPB-205ENST00000559245 TCF7P36402 384 aaPredicted RBP18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 PTH1RQ03431 593 aa18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 MGAT3Q09327 533 aa18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 LPIN1Q14693 890 aa18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 CTC1Q2NKJ3 1217 aa18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 TAF2Q6P1X5 1199 aa18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 GIMAP8Q8ND71 665 aaPredicted RBP18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 NCOA7Q8NI08 942 aa18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 RC3H2Q9HBD1 1191 aaKnown RBP18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 TAF6LQ9Y6J9 622 aa18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 WDFY4Q6ZS81 3184 aa18.72■□□□□ 0.59
CDC42BPB-205ENST00000559245 E7EWF7 191 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 PIK3CDO00329 1044 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 ENPP3O14638 875 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 MEIS2O14770 477 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 IRS1P35568 1242 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 DLX2Q07687 328 aaPredicted RBP18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 HYAL1Q12794 435 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 PPFIA1Q13136 1202 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 CLUL1Q15846 466 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 RSPH3Q86UC2 560 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 CLP1Q92989 425 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 SPZ1Q9BXG8 430 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 UPF3BQ9BZI7 483 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 PLXNA4Q9HCM2 1894 aa18.71■□□□□ 0.59
CDC42BPB-205ENST00000559245 MBTPS2O43462 519 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 ATP9AO75110 1047 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 TECTAO75443 2155 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 GSPT1P15170 499 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 ANTXR2P58335 489 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 BTG3Q14201 252 aaPredicted RBP18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 SMAD2Q15796 467 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 GRIK4Q16099 956 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 IGDCC4Q8TDY8 1250 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 DNAJB3Q8WWF6 145 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 ZNF689Q96CS4 500 aaPredicted RBP18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 GPRASP2Q96D09 838 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 RRP36Q96EU6 259 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 TUBE1Q9UJT0 475 aa18.7■□□□□ 0.58
CDC42BPB-205ENST00000559245 GSTTP1A0A1W2PQM5 241 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 CSPG5O95196 566 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 KCNA2P16389 499 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 MARK3P27448 753 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 FBXO47Q5MNV8 452 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 TTC22Q5TAA0 569 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 RUFY2Q8WXA3 655 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 SEPT1Q8WYJ6 367 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 MAP3K14Q99558 947 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 POP1Q99575 1024 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 IGFLR1Q9H665 355 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 ERAP1Q9NZ08 941 aa18.69■□□□□ 0.58
CDC42BPB-205ENST00000559245 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms