RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 B3GALT1Q9Y5Z6 326 aa14.85□□□□□ -0.03
CASC4-208ENST00000559151 FBXO21O94952 628 aa14.84□□□□□ -0.03
CASC4-208ENST00000559151 RAB27AP51159 221 aa14.84□□□□□ -0.03
CASC4-208ENST00000559151 CYP4F22Q6NT55 531 aa14.84□□□□□ -0.03
CASC4-208ENST00000559151 ZBTB46Q86UZ6 589 aa14.84□□□□□ -0.03
CASC4-208ENST00000559151 DCP2Q8IU60 420 aaKnown RBP14.84□□□□□ -0.03
CASC4-208ENST00000559151 SHISA4Q96DD7 197 aa14.84□□□□□ -0.03
CASC4-208ENST00000559151 SMOC1Q9H4F8 434 aa14.84□□□□□ -0.03
CASC4-208ENST00000559151 MYOTQ9UBF9 498 aa14.84□□□□□ -0.03
CASC4-208ENST00000559151 SHTN1A0MZ66 631 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 MAFKO60675 156 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 ADAMTS4O75173 837 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 RNASE1P07998 156 aaKnown RBP14.83□□□□□ -0.04
CASC4-208ENST00000559151 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
CASC4-208ENST00000559151 SMAD3P84022 425 aaKnown RBP14.83□□□□□ -0.04
CASC4-208ENST00000559151 FAPQ12884 760 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 LRRC41Q15345 812 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 SMAD2Q15796 467 aaKnown RBP14.83□□□□□ -0.04
CASC4-208ENST00000559151 CCDC181Q5TID7 509 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 TP53INP2Q8IXH6 220 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 NETO2Q8NC67 525 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 CHMP4CQ96CF2 233 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 AASDHPPTQ9NRN7 309 aa14.83□□□□□ -0.04
CASC4-208ENST00000559151 SGSM2O43147 1006 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 AKAP10O43572 662 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 PTX3P26022 381 aaPredicted RBP14.82□□□□□ -0.04
CASC4-208ENST00000559151 TUSC3Q13454 348 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 PPP2R5AQ15172 486 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 LILRA2Q8N149 483 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 SEC14L1Q92503 715 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 HOOK2Q96ED9 719 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 C14orf119Q9NWQ9 140 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 ASH2LQ9UBL3 628 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 NUB1Q9Y5A7 615 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 PCDHB4Q9Y5E5 795 aa14.82□□□□□ -0.04
CASC4-208ENST00000559151 PHC1P78364 1004 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 TMEM132BQ14DG7 1078 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 MYLIPQ8WY64 445 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 AP5M1Q9H0R1 490 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 TNFRSF12AQ9NP84 129 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 KCNH7Q9NS40 1196 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 PALD1Q9ULE6 856 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 CTNND2Q9UQB3 1225 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 ZNF652Q9Y2D9 606 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 FAN1Q9Y2M0 1017 aa14.81□□□□□ -0.04
CASC4-208ENST00000559151 FAM90A27PA6NNH2 459 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 MT-CO1P00395 513 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 DBHP09172 617 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 MYBL2P10244 700 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 RAC2P15153 192 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 PNLIPP16233 465 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 LSP1P33241 339 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 EPHA5P54756 1037 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 PTPN21Q16825 1174 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 INAVAQ3KP66 663 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 ESRP1Q6NXG1 681 aaKnown RBP14.8□□□□□ -0.04
CASC4-208ENST00000559151 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.8□□□□□ -0.04
CASC4-208ENST00000559151 PHOSPHO1Q8TCT1 267 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 ZMAT4Q9H898 229 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 SPEF1Q9Y4P9 236 aa14.8□□□□□ -0.04
CASC4-208ENST00000559151 LCHNA4D1U4 455 aa14.79□□□□□ -0.04
CASC4-208ENST00000559151 TSPAN6O43657 245 aa14.79□□□□□ -0.04
CASC4-208ENST00000559151 PTPN1P18031 435 aaKnown RBP14.79□□□□□ -0.04
CASC4-208ENST00000559151 ARL4AP40617 200 aa14.79□□□□□ -0.04
CASC4-208ENST00000559151 KLF1Q13351 362 aaPredicted RBP14.79□□□□□ -0.04
CASC4-208ENST00000559151 BTBD8Q5XKL5 378 aa14.79□□□□□ -0.04
CASC4-208ENST00000559151 CC2D1AQ6P1N0 951 aaPredicted RBP14.79□□□□□ -0.04
CASC4-208ENST00000559151 AGBL5Q8NDL9 886 aa14.79□□□□□ -0.04
CASC4-208ENST00000559151 ACSS2Q9NR19 701 aa14.79□□□□□ -0.04
CASC4-208ENST00000559151 TOPORSQ9NS56 1045 aaPredicted RBP14.79□□□□□ -0.04
CASC4-208ENST00000559151 RIC8BQ9NVN3 520 aa14.79□□□□□ -0.04
CASC4-208ENST00000559151 ZIM2Q9NZV7 527 aa14.79□□□□□ -0.04
CASC4-208ENST00000559151 SRGAP3O43295 1099 aa14.78□□□□□ -0.04
CASC4-208ENST00000559151 BUB1BO60566 1050 aaPredicted RBP14.78□□□□□ -0.04
CASC4-208ENST00000559151 SCGB1D2O95969 90 aa14.78□□□□□ -0.04
CASC4-208ENST00000559151 PIN1Q13526 163 aaPredicted RBP14.78□□□□□ -0.04
CASC4-208ENST00000559151 RASSF3Q86WH2 238 aa14.78□□□□□ -0.04
CASC4-208ENST00000559151 CMIPQ8IY22 773 aa14.78□□□□□ -0.04
CASC4-208ENST00000559151 CLEC4DQ8WXI8 215 aa14.78□□□□□ -0.04
CASC4-208ENST00000559151 WASHC2AQ641Q2 1341 aa14.77□□□□□ -0.04
CASC4-208ENST00000559151 ZC3H12DA2A288 527 aaKnown RBP14.77□□□□□ -0.05
CASC4-208ENST00000559151 WNT11O96014 354 aa14.77□□□□□ -0.05
CASC4-208ENST00000559151 SNX17Q15036 470 aa14.77□□□□□ -0.05
CASC4-208ENST00000559151 ZNF792Q3KQV3 632 aa14.77□□□□□ -0.05
CASC4-208ENST00000559151 GPR158Q5T848 1215 aa14.77□□□□□ -0.05
CASC4-208ENST00000559151 WDR75Q8IWA0 830 aaKnown RBP14.77□□□□□ -0.05
CASC4-208ENST00000559151 ZNF610Q8N9Z0 462 aa14.77□□□□□ -0.05
CASC4-208ENST00000559151 NOC2LQ9Y3T9 749 aaKnown RBP14.77□□□□□ -0.05
CASC4-208ENST00000559151 TCRBV5S2A0A599 114 aa14.76□□□□□ -0.05
CASC4-208ENST00000559151 C4BPAP04003 597 aaKnown RBP14.76□□□□□ -0.05
CASC4-208ENST00000559151 GJA4P35212 333 aa14.76□□□□□ -0.05
CASC4-208ENST00000559151 MILR1Q7Z6M3 343 aa14.76□□□□□ -0.05
CASC4-208ENST00000559151 FUBP3Q96I24 572 aaKnown RBP eCLIP14.76□□□□□ -0.05
CASC4-208ENST00000559151 RTFDC1Q9BY42 306 aaPredicted RBP14.76□□□□□ -0.05
CASC4-208ENST00000559151 RNF32Q9H0A6 362 aa14.76□□□□□ -0.05
CASC4-208ENST00000559151 PCMTD2Q9NV79 361 aa14.76□□□□□ -0.05
CASC4-208ENST00000559151 CYP17A1P05093 508 aa14.75□□□□□ -0.05
CASC4-208ENST00000559151 SDHBP21912 280 aa14.75□□□□□ -0.05
CASC4-208ENST00000559151 GRIN1Q05586 938 aa14.75□□□□□ -0.05
CASC4-208ENST00000559151 ZDHHC5Q9C0B5 715 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms