RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZSCAN22P10073 491 aaPredicted RBP12.33□□□□□ -0.44
TPM1-217ENST00000559108 ATP4AP20648 1035 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 TCF7P36402 384 aaPredicted RBP12.33□□□□□ -0.44
TPM1-217ENST00000559108 TRAPPC10P48553 1259 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 GRIN1Q05586 938 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 GNL2Q13823 731 aaKnown RBP12.33□□□□□ -0.44
TPM1-217ENST00000559108 PTPAQ15257 358 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 LRRC26Q2I0M4 334 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 LRCH2Q5VUJ6 765 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 ABHD15Q6UXT9 468 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 RNF180Q86T96 592 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 RIT2Q99578 217 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
TPM1-217ENST00000559108 C11orf49Q9H6J7 331 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 WRAP73Q9P2S5 460 aaPredicted RBP12.33□□□□□ -0.44
TPM1-217ENST00000559108 CLIC4Q9Y696 253 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 ELP1O95163 1332 aa12.33□□□□□ -0.44
TPM1-217ENST00000559108 KBTBD13C9JR72 458 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 GAS7O60861 476 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 LGR5O75473 907 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 CPT1AP50416 773 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 ATN1P54259 1190 aaPredicted RBP12.32□□□□□ -0.44
TPM1-217ENST00000559108 PTGDRQ13258 359 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 SNX17Q15036 470 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 CALCRLQ16602 461 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
TPM1-217ENST00000559108 UTP14CQ5TAP6 766 aaKnown RBP12.32□□□□□ -0.44
TPM1-217ENST00000559108 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
TPM1-217ENST00000559108 BRAPQ7Z569 592 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 ZBTB10Q96DT7 871 aa12.32□□□□□ -0.44
TPM1-217ENST00000559108 SENP6Q9GZR1 1112 aaPredicted RBP12.32□□□□□ -0.44
TPM1-217ENST00000559108 TMEM150BA6NC51 233 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 MOXD2PA6NHM9 499 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 POTEMA6NI47 508 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 PP2D1A8MPX8 630 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 TBX3O15119 743 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 ZNF862O60290 1169 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 STBD1O95210 358 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 OR52Z1P0C646 297 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 SUPT20HL2P0C7V6 817 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 ATP2C1P98194 919 aaPredicted RBP12.31□□□□□ -0.44
TPM1-217ENST00000559108 PPP2R5CQ13362 524 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 RILPL1Q5EBL4 403 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 ZNF746Q6NUN9 644 aaPredicted RBP12.31□□□□□ -0.44
TPM1-217ENST00000559108 SLC39A5Q6ZMH5 540 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 SLC43A3Q8NBI5 491 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 SDF4Q9BRK5 362 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 RNPEPQ9H4A4 650 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 TBC1D22BQ9NU19 505 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 NOL7Q9UMY1 257 aaKnown RBP12.31□□□□□ -0.44
TPM1-217ENST00000559108 TANC1Q9C0D5 1861 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 EMSYQ7Z589 1322 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 IGSF9BQ9UPX0 1349 aa12.31□□□□□ -0.44
TPM1-217ENST00000559108 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 PPFIA4O75335 1185 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 MARK3P27448 753 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 TXKP42681 527 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 RGS19P49795 217 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 PSEN2P49810 448 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 CDK7P50613 346 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 ZNF200P98182 395 aaPredicted RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 DGKDQ16760 1214 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 NBPF20Q3BBV1 942 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 TRIM60Q495X7 471 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 NECAB2Q7Z6G3 386 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 PCSK9Q8NBP7 692 aaKnown RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 GIMAP8Q8ND71 665 aaPredicted RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 SEPT1Q8WYJ6 367 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 WNT8BQ93098 351 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 TEKT3Q9BXF9 490 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 TTC12Q9H892 705 aaPredicted RBP12.3□□□□□ -0.44
TPM1-217ENST00000559108 SPC25Q9HBM1 224 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 RGL1Q9NZL6 768 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 SCN5AQ14524 2016 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 KAT6AQ92794 2004 aa12.3□□□□□ -0.44
TPM1-217ENST00000559108 EVPLQ92817 2033 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 ZBTB42B2RXF5 422 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 H3BRB1 525 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 HOXC8P31273 242 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 KRT76Q01546 638 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 DNM1Q05193 864 aaKnown RBP12.29□□□□□ -0.44
TPM1-217ENST00000559108 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
TPM1-217ENST00000559108 ITGA7Q13683 1181 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 MFSD10Q14728 455 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 PLCB4Q15147 1175 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 ECM1Q16610 540 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 KIAA0753Q2KHM9 967 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 NCAPH2Q6IBW4 605 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 SWSAP1Q6NVH7 229 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 BANK1Q8NDB2 785 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 LRRC15Q8TF66 581 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 TRAPPC12Q8WVT3 735 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms