RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 LMBR1Q8WVP7 490 aa17.28■□□□□ 0.36
SMAD6-203ENST00000558937 PPM1EQ8WY54 764 aa17.28■□□□□ 0.36
SMAD6-203ENST00000558937 MXRA8Q9BRK3 442 aa17.28■□□□□ 0.36
SMAD6-203ENST00000558937 COL25A1Q9BXS0 654 aaPredicted RBP17.28■□□□□ 0.36
SMAD6-203ENST00000558937 TMEM260Q9NX78 707 aa17.28■□□□□ 0.36
SMAD6-203ENST00000558937 EMSYQ7Z589 1322 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 CDH23Q9H251 3354 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 CCDC196A0A1B0GTZ2 297 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 KIF28PB7ZC32 967 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 MAFGO15525 162 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 FOSP01100 380 aaPredicted RBP17.27■□□□□ 0.36
SMAD6-203ENST00000558937 NEFLP07196 543 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 CTSHP09668 335 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 GNAT1P11488 350 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 ADAM17P78536 824 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 ARHGAP4P98171 946 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 AP3B2Q13367 1082 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 PFKFB3Q16875 520 aaPredicted RBP17.27■□□□□ 0.36
SMAD6-203ENST00000558937 SEPT1Q8WYJ6 367 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 AGXT2Q9BYV1 514 aa17.27■□□□□ 0.36
SMAD6-203ENST00000558937 COL4A4P53420 1690 aaPredicted RBP17.26■□□□□ 0.35
SMAD6-203ENST00000558937 TLL1O43897 1013 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 EFCAB14O75071 495 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 CAND2O75155 1236 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 SCG2P13521 617 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 MARK3P27448 753 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 SREBF1P36956 1147 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 CLK2P49760 499 aaKnown RBP17.26■□□□□ 0.35
SMAD6-203ENST00000558937 TAP1Q03518 808 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 IKBKEQ14164 716 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 FBXL16Q8N461 479 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 DBF4BQ8NFT6 615 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 CYP2W1Q8TAV3 490 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 GLT8D2Q9H1C3 349 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 CERS4Q9HA82 394 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 JPH1Q9HDC5 661 aaPredicted RBP17.26■□□□□ 0.35
SMAD6-203ENST00000558937 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 KCNH7Q9NS40 1196 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 SIP14410 1827 aa17.26■□□□□ 0.35
SMAD6-203ENST00000558937 NRCAMQ92823 1304 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 EPOPA6NHQ4 379 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 RFXAPO00287 272 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 ARP10275 920 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 PSMA5P28066 241 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 PPFIA1Q13136 1202 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 CEP55Q53EZ4 464 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 OSBPL7Q9BZF2 842 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 ERAP1Q9NZ08 941 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 SLC9A2Q9UBY0 812 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 CHD9Q3L8U1 2897 aa17.25■□□□□ 0.35
SMAD6-203ENST00000558937 NFASCO94856 1347 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 ESYT2A0FGR8 921 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 LCHNA4D1U4 455 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
SMAD6-203ENST00000558937 GJB5O95377 273 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
SMAD6-203ENST00000558937 CCDC85BQ15834 202 aaPredicted RBP17.24■□□□□ 0.35
SMAD6-203ENST00000558937 PKN1Q16512 942 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 JAKMIP3Q5VZ66 844 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
SMAD6-203ENST00000558937 SPRED2Q7Z698 418 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 ARNTL2Q8WYA1 636 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 GLG1Q92896 1179 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 PCYT2Q99447 389 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 SDF4Q9BRK5 362 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 ZBED2Q9BTP6 218 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 SMARCAD1Q9H4L7 1026 aa17.24■□□□□ 0.35
SMAD6-203ENST00000558937 CUL9Q8IWT3 2517 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 ADAMTS3O15072 1205 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 EPB41L2O43491 1005 aaKnown RBP17.23■□□□□ 0.35
SMAD6-203ENST00000558937 ITGB3BPQ13352 177 aaPredicted RBP17.23■□□□□ 0.35
SMAD6-203ENST00000558937 GRIK4Q16099 956 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 FAM26DQ5JW98 314 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 FAM117BQ6P1L5 589 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 RUFY4Q6ZNE9 571 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 SEPT8Q92599 483 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 PHKBQ93100 1093 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 ZMYND12Q9H0C1 365 aa17.23■□□□□ 0.35
SMAD6-203ENST00000558937 AGO4Q9HCK5 861 aaKnown RBP17.23■□□□□ 0.35
SMAD6-203ENST00000558937 MEIS1O00470 390 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 PPFIA3O75145 1194 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 ZNF76P36508 570 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 ACTR2P61160 394 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 NTRK3Q16288 839 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 TAF2Q6P1X5 1199 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
SMAD6-203ENST00000558937 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 TUBE1Q9UJT0 475 aa17.22■□□□□ 0.35
SMAD6-203ENST00000558937 PRRC2BQ5JSZ5 2229 aaKnown RBP17.21■□□□□ 0.35
SMAD6-203ENST00000558937 MBLAC1A4D2B0 266 aaPredicted RBP17.21■□□□□ 0.35
SMAD6-203ENST00000558937 AMHP03971 560 aa17.21■□□□□ 0.35
SMAD6-203ENST00000558937 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
SMAD6-203ENST00000558937 EVCP57679 992 aa17.21■□□□□ 0.35
SMAD6-203ENST00000558937 CCT2P78371 535 aaKnown RBP17.21■□□□□ 0.35
SMAD6-203ENST00000558937 AKAP17AQ02040 695 aaKnown RBP17.21■□□□□ 0.35
SMAD6-203ENST00000558937 TOB2Q14106 344 aaPredicted RBP17.21■□□□□ 0.35
SMAD6-203ENST00000558937 RUFY3Q7L099 469 aa17.21■□□□□ 0.35
SMAD6-203ENST00000558937 NIPA1Q7RTP0 329 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms